BS26503.complete Sequence
557 bp assembled on 2011-08-26
GenBank Submission: KX804050
> BS26503.complete
GAAGTTATCAGTCGACATGAGGACGACCACTCTACTTTTGAGCCTTGGCC
TTCTGGTCCTGTGCTTTTCCAGCTACAGTTTTGCCGAAGACGATCCCACC
GATGGAAGCACAACGCCTACTGATGGAAGCACCACGCCCACTGATGGAAG
CACCACGCCCACTGATGGAAGCACGACGCCCACTGATGGAAGCAACACGC
CCACTGATGGAAGCACGACGCCCACTGATGGAAGCACCACGCCCACTGAT
GGAAGCACCACGCCCACTGATGGAAGCACCACGCCCACTGATGGAAGCAC
CTCCCCATCGACCTCTCCTTCAACAGGCGATAACACTAGTCCTTCAACAG
GATCGCCAGATAGCACCCCCGATTCCGGAAGCGGCAGCAGCAACAACAGC
GGCAACAACAAGCGGAACAACCGTCGGAGGCGCCGCCAGCGGGCTCAACG
CGCTCGACGTCGCCGGGCTCAGCAGGCTCGGCGCAGGAGGAACCGTCGCA
ATAACAGGAATAACAGGCTAAGCAGAACCAATAGCATTTAAAAGCTTTCT
AGACCAT
BS26503.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:17:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14852-RA | 525 | CG14852-PA | 1..525 | 17..541 | 2625 | 100 | Plus |
CG14852-RA | 525 | CG14852-PA | 79..243 | 137..301 | 720 | 95.8 | Plus |
CG14852-RA | 525 | CG14852-PA | 121..285 | 95..259 | 720 | 95.8 | Plus |
CG14852-RA | 525 | CG14852-PA | 79..222 | 158..301 | 600 | 94.4 | Plus |
CG14852-RA | 525 | CG14852-PA | 142..285 | 95..238 | 600 | 94.4 | Plus |
CG14852-RA | 525 | CG14852-PA | 79..200 | 179..300 | 505 | 94.3 | Plus |
CG14852-RA | 525 | CG14852-PA | 163..284 | 95..216 | 505 | 94.3 | Plus |
CG14852-RA | 525 | CG14852-PA | 79..178 | 200..299 | 440 | 96 | Plus |
CG14852-RA | 525 | CG14852-PA | 184..283 | 95..194 | 440 | 96 | Plus |
CG14852-RA | 525 | CG14852-PA | 79..158 | 221..300 | 355 | 96.2 | Plus |
CG14852-RA | 525 | CG14852-PA | 205..284 | 95..174 | 355 | 96.2 | Plus |
CG14852-RA | 525 | CG14852-PA | 79..138 | 242..301 | 255 | 95 | Plus |
CG14852-RA | 525 | CG14852-PA | 226..285 | 95..154 | 255 | 95 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:17:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14852-RA | 587 | CG14852-RA | 20..544 | 17..541 | 2625 | 100 | Plus |
CG14852-RA | 587 | CG14852-RA | 98..262 | 137..301 | 720 | 95.8 | Plus |
CG14852-RA | 587 | CG14852-RA | 140..304 | 95..259 | 720 | 95.8 | Plus |
CG14852-RA | 587 | CG14852-RA | 98..241 | 158..301 | 600 | 94.4 | Plus |
CG14852-RA | 587 | CG14852-RA | 161..304 | 95..238 | 600 | 94.4 | Plus |
CG14852-RA | 587 | CG14852-RA | 98..219 | 179..300 | 505 | 94.3 | Plus |
CG14852-RA | 587 | CG14852-RA | 182..303 | 95..216 | 505 | 94.3 | Plus |
CG14852-RA | 587 | CG14852-RA | 98..197 | 200..299 | 440 | 96 | Plus |
CG14852-RA | 587 | CG14852-RA | 203..302 | 95..194 | 440 | 96 | Plus |
CG14852-RA | 587 | CG14852-RA | 98..177 | 221..300 | 355 | 96.2 | Plus |
CG14852-RA | 587 | CG14852-RA | 224..303 | 95..174 | 355 | 96.2 | Plus |
CG14852-RA | 587 | CG14852-RA | 98..157 | 242..301 | 255 | 95 | Plus |
CG14852-RA | 587 | CG14852-RA | 245..304 | 95..154 | 255 | 95 | Plus |
CG31313-RA | 782 | CG31313-RA | 744..782 | 541..503 | 195 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:17:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14565946..14566470 | 17..541 | 2625 | 100 | Plus |
3R | 32079331 | 3R | 14566024..14566188 | 137..301 | 720 | 95.8 | Plus |
3R | 32079331 | 3R | 14566066..14566230 | 95..259 | 720 | 95.8 | Plus |
3R | 32079331 | 3R | 14566024..14566167 | 158..301 | 600 | 94.4 | Plus |
3R | 32079331 | 3R | 14566087..14566230 | 95..238 | 600 | 94.4 | Plus |
3R | 32079331 | 3R | 14566024..14566145 | 179..300 | 505 | 94.3 | Plus |
3R | 32079331 | 3R | 14566108..14566229 | 95..216 | 505 | 94.3 | Plus |
3R | 32079331 | 3R | 14566024..14566123 | 200..299 | 440 | 96 | Plus |
3R | 32079331 | 3R | 14566129..14566228 | 95..194 | 440 | 96 | Plus |
3R | 32079331 | 3R | 14566024..14566103 | 221..300 | 355 | 96.2 | Plus |
3R | 32079331 | 3R | 14566150..14566229 | 95..174 | 355 | 96.2 | Plus |
3R | 32079331 | 3R | 14566024..14566083 | 242..301 | 255 | 95 | Plus |
3R | 32079331 | 3R | 14566171..14566230 | 95..154 | 255 | 95 | Plus |
Blast to na_te.dros performed 2014-11-26 22:17:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6876 | 385..536 | 191 | 60 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2319..2519 | 345..543 | 189 | 57.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6702..6918 | 322..536 | 171 | 56.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6923 | 327..535 | 162 | 57.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6716..6906 | 358..542 | 155 | 57.1 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1079..1151 | 345..421 | 150 | 70.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6790..6938 | 293..440 | 147 | 58.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2291..2511 | 217..433 | 140 | 55.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2631..2663 | 379..411 | 138 | 90.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2316..2421 | 315..421 | 136 | 59.8 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1054..1123 | 369..438 | 134 | 65.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6728..6838 | 306..423 | 132 | 61 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2293..2432 | 282..420 | 128 | 61.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6794..6859 | 345..411 | 125 | 67.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2592..2664 | 376..449 | 124 | 64.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2434..2540 | 307..420 | 121 | 60.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2808..2883 | 345..421 | 121 | 63.6 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1100..1176 | 345..420 | 120 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1508..1591 | 354..440 | 113 | 60.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2326..2369 | 380..423 | 112 | 72.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..7002 | 273..536 | 112 | 54.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1514..1585 | 338..410 | 111 | 65.3 | Plus |
TART-A | 13424 | TART-A 13424bp | 907..944 | 376..413 | 109 | 76.3 | Plus |
TART-A | 13424 | TART-A 13424bp | 8638..8666 | 377..405 | 109 | 86.2 | Plus |
TART-A | 13424 | TART-A 13424bp | 12085..12122 | 376..413 | 109 | 76.3 | Plus |
BS26503.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:22 Download gff for
BS26503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14852-RA | 1..523 | 17..539 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:53:07 Download gff for
BS26503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14852-RA | 20..542 | 17..539 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:56:35 Download gff for
BS26503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14852-RA | 20..542 | 17..539 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:56:35 Download gff for
BS26503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14565946..14566468 | 17..539 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:53:07 Download gff for
BS26503.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 10391668..10392190 | 17..539 | 100 | | Plus |
BS26503.pep Sequence
Translation from 16 to 540
> BS26503.pep
MRTTTLLLSLGLLVLCFSSYSFAEDDPTDGSTTPTDGSTTPTDGSTTPTD
GSTTPTDGSNTPTDGSTTPTDGSTTPTDGSTTPTDGSTTPTDGSTSPSTS
PSTGDNTSPSTGSPDSTPDSGSGSSNNSGNNKRNNRRRRRQRAQRARRRR
AQQARRRRNRRNNRNNRLSRTNSI*
BS26503.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14852-PA | 174 | CG14852-PA | 1..174 | 1..174 | 909 | 100 | Plus |
CG34105-PA | 157 | CG34105-PA | 6..155 | 7..167 | 223 | 37.8 | Plus |
CG12491-PA | 157 | CG12491-PA | 6..155 | 7..167 | 223 | 37.8 | Plus |
CG13560-PB | 181 | CG13560-PB | 6..179 | 7..164 | 221 | 36.4 | Plus |
CG13560-PA | 181 | CG13560-PA | 6..179 | 7..164 | 221 | 36.4 | Plus |