BS26508.complete Sequence
1147 bp assembled on 2011-09-14
GenBank Submission: KX800442
> BS26508.complete
GAAGTTATCAGTCGACATGTGTAATTTTCATCTTCTGCTGATTCTTGCCA
CAGCACTGGGCGATTTGGCTTGTGCCACGCCCTCTCTGCGTTCCGCCTCC
GATCCTGAGAAGATCTTAAACAATCTAGCTCAACTAAGGCAGAGTAGCTT
TCTGGACTGGATTCAATCGATCCTGGGACCCGAGGTGCCAGCCGAATGGA
GCTCTCCGGCCAAAAGGGAGTGCGCAGAGTGCTCCTGTGGTAATATCAAT
ACTCGTCATCGCATCGTCGGAGGTCAGGAGACGGAGGTCCATGAGTATCC
CTGGATGATAATGCTCATGTGGTTCGGTAATTTCTATTGCGGCGCTTCTT
TGGTTAACGATCAGTATGCCTTAACCGCTGCCCATTGTGTAAATGGCTTC
TACCATCGTTTGATCACGGTCCGATTGCTGGAGCATAATCGTCAGGATAG
CCACGTCAAGATCGTGGATCGCCGGGTTTCCAGGGTGCTCATCCACCCGA
AGTACAGCACCAGGAACTTTGACAGTGACATTGCTTTGATTCGTTTCAAT
GAACCAGTTCGTCTTGGCATCGATATGCATCCAGTATGCATGCCCACTCC
GAGCGAAAATTATGCGGGTCAAACTGCCGTGGTCACCGGATGGGGAGCTC
TGAGTGAGGGCGGACCAATTTCTGATACCCTCCAGGAGGTGGAAGTGCCC
ATCCTCAGCCAAGAAGAGTGCCGCAATAGCAACTACGGCGAGTCCAAGAT
TACCGACAACATGATCTGTGCCGGCTACGTGGAGCAAGGTGGCAAGGACT
CCTGCCAAGGAGACAGCGGTGGACCCATGCATGTACTGGGTTCCGGCGAC
GCTTACCAGCTGGCAGGAATCGTGTCCTGGGGCGAAGGATGTGCCAAGCC
GAATGCCCCGGGCGTTTATACACGAGTGGGCAGCTTCAATGATTGGATTG
CGGAGAACACCAGGGATGCCTGCTCCTGTGCCCAACCAGAAGCTGCTGGG
GAACCAGCTTCCCCTATGGAAACCACCGAGCAGGGAGACCAAGAGAACAC
CACTGCAAATGGAGCAGCAGAAGCAGATCCCGAGGTGGAGGAGGCCAATA
AGTTGATTTGAAAGCTTTCTAGACCATTCGTTTGGCGCTCTTATGGG
BS26508.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:33:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18735-RA | 1095 | CG18735-PA | 1..1095 | 17..1111 | 5475 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:33:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18735-RA | 1179 | CG18735-RA | 29..1126 | 16..1113 | 5490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:33:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21798070..21799167 | 1113..16 | 5490 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 07:33:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Doc2-element | 4789 | Doc2-element DOC2 4789bp | 1358..1426 | 97..29 | 120 | 63.8 | Minus |
BS26508.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 12:05:46 Download gff for
BS26508.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18735-RA | 1..1095 | 17..1111 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:17:53 Download gff for
BS26508.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18735-RA | 30..1128 | 17..1117 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:12:59 Download gff for
BS26508.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18735-RA | 30..1128 | 17..1117 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:12:59 Download gff for
BS26508.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21798068..21799166 | 17..1117 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:17:53 Download gff for
BS26508.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17685573..17686671 | 17..1117 | 99 | | Minus |
BS26508.pep Sequence
Translation from 16 to 1110
> BS26508.pep
MCNFHLLLILATALGDLACATPSLRSASDPEKILNNLAQLRQSSFLDWIQ
SILGPEVPAEWSSPAKRECAECSCGNINTRHRIVGGQETEVHEYPWMIML
MWFGNFYCGASLVNDQYALTAAHCVNGFYHRLITVRLLEHNRQDSHVKIV
DRRVSRVLIHPKYSTRNFDSDIALIRFNEPVRLGIDMHPVCMPTPSENYA
GQTAVVTGWGALSEGGPISDTLQEVEVPILSQEECRNSNYGESKITDNMI
CAGYVEQGGKDSCQGDSGGPMHVLGSGDAYQLAGIVSWGEGCAKPNAPGV
YTRVGSFNDWIAENTRDACSCAQPEAAGEPASPMETTEQGDQENTTANGA
AEADPEVEEANKLI*
BS26508.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:18:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18735-PA | 364 | CG18735-PA | 1..364 | 1..364 | 1957 | 100 | Plus |
| CG4386-PA | 372 | CG4386-PA | 53..366 | 22..323 | 893 | 54.1 | Plus |
| CG9294-PB | 352 | CG9294-PB | 82..344 | 64..321 | 739 | 51.7 | Plus |
| CG4914-PA | 374 | CG4914-PA | 83..370 | 36..321 | 654 | 46 | Plus |
| CG3355-PA | 314 | CG3355-PA | 43..312 | 58..321 | 630 | 47.1 | Plus |
