BS26510.complete Sequence
1037 bp assembled on 2011-09-14
GenBank Submission: KX804251
> BS26510.complete
GAAGTTATCAGTCGACATGATGCAGCCATGGGCCGTTGTGGTCCTACTTC
TGCCCCTGATCAACGGAGATGTGAGTCACCTGCCCAGGGAATATATACCG
CCCAGTGCGGAACTGGAGCCAACCACACGGTCTGCTGCTGATGGCCAGGA
GGTGCAGAAGGATCCATCTGGATTCTATCCATCGACTGGACTGCCACTGC
CGCCGGGCTATGCCATTCCCACGGGCAGCAACGTTTTGCCACAGCCTGTC
CAGCCGCCAAACTTCCCTCTGCCCATCTATCCACCATTCTACGGCTTCGG
CGGAGGTCCTGTCGAGCAGGGAGGAGGACATGGTATTGGGCCAGTGCCTT
CGGCCTATCCCAACGGAGGTGCATTCCCGGCGGGTCCTACCAATGGAGGC
GCATTCGCAGGGGGTCCTACGAATGCGGCCTTCCAACTGCCACCAGGTGG
TCCTTTCGGTCCGCAAGCTGGTAATTTTGCCCAGCCAGGTGGTTTCCCGC
AGGCAGGTGGGTTTCCCCCACAAGGAGCTGGCTTCCAGCCACAAGGCATC
CCTGGCAATGGATTCCCAACGCAAGGAGCTCCCTTCTCACCACAGCAGGG
AGTGTTCCCATCACAAGGAGGTGCCTTCGGGCCACAGGGAATACCGGGCA
ATGGTTTCCTAGGAGGTAACTTCCCGCCACAGGGAGGGCCCTTCCCAGGA
TCCGCATATCCACCGGAGTTCTTGACAAACCAGGGACTTCCCCTCACAAA
TCCCCAGGGTCCCTTCCAAGGACCCAGTCCAGCAGGATTCAATGTGCCCG
CAGGATTCGGCGGACCTGTGCCCGGCCAGAATCCCTACCAACAATTTGGA
CCCGGTTTCGGAGGACCCGCTCCGCCGGGCTACTCCGATGAGCCGGCGAA
GGAGCAACCAAAGGACAGTGAGAGGACAGTAGTGGCACCACCATCGGCCG
ACGATCCCAAGAGTGTGGCGGATACGGTTTACGCATCCAATGGCGGCTAT
GTCTACAAGAGGGCCAAGTAAAAGCTTTCTAGACCAT
BS26510.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:33:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11581-RB | 1005 | CG11581-PB | 1..1005 | 17..1021 | 5025 | 100 | Plus |
| CG11581-RA | 1005 | CG11581-PA | 1..1005 | 17..1021 | 5025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:33:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11581-RB | 1534 | CG11581-RB | 20..1029 | 12..1021 | 5035 | 99.9 | Plus |
| CG11581-RA | 1096 | CG11581-RA | 20..1029 | 12..1021 | 5035 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:33:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14176942..14177951 | 12..1021 | 5035 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:33:13 has no hits.
BS26510.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 12:05:45 Download gff for
BS26510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11581-RA | 1..1003 | 17..1019 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:17:42 Download gff for
BS26510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11581-RA | 25..1027 | 17..1019 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:12:53 Download gff for
BS26510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11581-RA | 25..1027 | 17..1019 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:12:53 Download gff for
BS26510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14176947..14177949 | 17..1019 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:17:42 Download gff for
BS26510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14070980..14071982 | 17..1019 | 100 | | Plus |
BS26510.pep Sequence
Translation from 16 to 1020
> BS26510.pep
MMQPWAVVVLLLPLINGDVSHLPREYIPPSAELEPTTRSAADGQEVQKDP
SGFYPSTGLPLPPGYAIPTGSNVLPQPVQPPNFPLPIYPPFYGFGGGPVE
QGGGHGIGPVPSAYPNGGAFPAGPTNGGAFAGGPTNAAFQLPPGGPFGPQ
AGNFAQPGGFPQAGGFPPQGAGFQPQGIPGNGFPTQGAPFSPQQGVFPSQ
GGAFGPQGIPGNGFLGGNFPPQGGPFPGSAYPPEFLTNQGLPLTNPQGPF
QGPSPAGFNVPAGFGGPVPGQNPYQQFGPGFGGPAPPGYSDEPAKEQPKD
SERTVVAPPSADDPKSVADTVYASNGGYVYKRAK*
BS26510.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:18:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11581-PB | 334 | CG11581-PB | 1..334 | 1..334 | 1868 | 100 | Plus |
| CG11581-PA | 334 | CG11581-PA | 1..334 | 1..334 | 1868 | 100 | Plus |
| CG15635-PB | 1136 | CG15635-PB | 408..717 | 21..293 | 209 | 30.6 | Plus |
| CG15635-PB | 1136 | CG15635-PB | 583..900 | 19..329 | 209 | 28.3 | Plus |
| CG15635-PB | 1136 | CG15635-PB | 288..604 | 19..328 | 200 | 29 | Plus |
| ZAP3-PF | 1258 | CG32685-PF | 1022..1223 | 89..303 | 196 | 31.1 | Plus |
| ZAP3-PD | 1293 | CG32685-PD | 1022..1223 | 89..303 | 196 | 31.1 | Plus |
| CG15635-PB | 1136 | CG15635-PB | 728..1064 | 13..314 | 184 | 28.4 | Plus |
| CG15635-PB | 1136 | CG15635-PB | 819..1092 | 19..273 | 174 | 32.2 | Plus |
