BS26537.complete Sequence
659 bp assembled on 2011-08-26
GenBank Submission: KX805130
> BS26537.complete
GAAGTTATCAGTCGACATGGCTGATGATGAGGCTAAGAAGGCTAAACAGG
CTGAGATCGAGCGCAAGCGTGCTGAGGTGCGCAAGCGCATGGAGGAAGCC
TCCAAGGCCAAGAAGGCCAAGAAGGGTTTCATGACCCCAGAGAGGAAGAA
GAAACTCAGGTTGCTGCTGCGTAAGAAAGCCGCTGAGGAGCTGAAGAAAG
AACAGGAACGCAAAGCGGCTGAACGTAGACGCATCATCGAAGAACGTTGC
GGCAGTCCCAGGAATCTCAGCGATGCCAGCGAAGGCGAATTGCAAGAGAT
TTGCGAAGAGTATTACGAGCGTATGTATATTTGTGAAGGCCAGAAATGGG
ATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGATCAACGATCTCAAT
GCCCAAGTTAACGATCTTCGCGGCAAGTTCGTCAAGCCAGCCCTGAAGAA
GGTCTCCAAATACGAAAACAAATTCGCCAAGCTGCAGAAGAAGGCCGCTG
AGTTCAACTTCCGCAACCAGCTCAAGGTGGTGAAGAAGAAGGAGTTCACG
CTGGAGGAGGAGGAGAAGGAGAAGAAACCCGACTGGTCCAAGGGCAAGCC
CGGAGATGCCAAGGTGAAGGAGGAGGTTGAGGCCGAAGCTTAAAAGCTTT
CTAGACCAT
BS26537.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:23:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wupA-RF | 627 | CG7178-PF | 1..627 | 17..643 | 3135 | 100 | Plus |
wupA-RC | 627 | CG7178-PC | 1..627 | 17..643 | 3135 | 100 | Plus |
wupA-RG | 810 | CG7178-PG | 196..810 | 29..643 | 3075 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:23:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wupA-RF | 1129 | CG7178-RF | 110..736 | 17..643 | 3135 | 100 | Plus |
wupA-RC | 1160 | CG7178-RC | 141..767 | 17..643 | 3135 | 100 | Plus |
wupA-RG | 1343 | CG7178-RG | 336..950 | 29..643 | 3075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:23:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18106681..18106822 | 571..430 | 710 | 100 | Minus |
X | 23542271 | X | 18113447..18113577 | 160..30 | 655 | 100 | Minus |
X | 23542271 | X | 18113257..18113382 | 285..160 | 630 | 100 | Minus |
X | 23542271 | X | 18109470..18109572 | 385..283 | 515 | 100 | Minus |
X | 23542271 | X | 18105961..18106034 | 643..570 | 370 | 100 | Minus |
X | 23542271 | X | 18106888..18106933 | 429..384 | 230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:23:10 has no hits.
BS26537.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:30 Download gff for
BS26537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wupA-RF | 104..728 | 17..641 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:56:19 Download gff for
BS26537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wupA-RC | 141..765 | 17..641 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:59:26 Download gff for
BS26537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wupA-RC | 141..765 | 17..641 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:59:26 Download gff for
BS26537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18105963..18106032 | 572..641 | 100 | <- | Minus |
X | 18106681..18106822 | 430..571 | 100 | <- | Minus |
X | 18106888..18106931 | 386..429 | 100 | <- | Minus |
X | 18109470..18109570 | 285..385 | 100 | <- | Minus |
X | 18113258..18113381 | 161..284 | 100 | <- | Minus |
X | 18113447..18113575 | 32..160 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:56:19 Download gff for
BS26537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17999996..18000065 | 572..641 | 100 | <- | Minus |
arm_X | 18000714..18000855 | 430..571 | 100 | <- | Minus |
arm_X | 18000921..18000964 | 386..429 | 100 | <- | Minus |
arm_X | 18003503..18003603 | 285..385 | 100 | <- | Minus |
arm_X | 18007291..18007414 | 161..284 | 100 | <- | Minus |
arm_X | 18007480..18007608 | 32..160 | 100 | <- | Minus |
BS26537.pep Sequence
Translation from 16 to 642
> BS26537.pep
MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLL
LRKKAAEELKKEQERKAAERRRIIEERCGSPRNLSDASEGELQEICEEYY
ERMYICEGQKWDLEYEVRKKDWEINDLNAQVNDLRGKFVKPALKKVSKYE
NKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKEKKPDWSKGKPGDAKV
KEEVEAEA*
BS26537.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:57:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wupA-PF | 208 | CG7178-PF | 1..208 | 1..208 | 1063 | 100 | Plus |
wupA-PC | 208 | CG7178-PC | 1..208 | 1..208 | 1063 | 100 | Plus |
wupA-PG | 269 | CG7178-PG | 65..269 | 4..208 | 1044 | 99.5 | Plus |
wupA-PE | 208 | CG7178-PE | 1..208 | 1..208 | 952 | 91.3 | Plus |
wupA-PD | 208 | CG7178-PD | 1..208 | 1..208 | 952 | 91.3 | Plus |