BS26551.complete Sequence
971 bp assembled on 2011-08-26
GenBank Submission: KX803433
> BS26551.complete
GAAGTTATCAGTCGACATGAACAAGTACGGGATGGTCGGCGTCTGCCTAC
TGGCTGCTCTGGGCGCTCTGCTCCTGGAGGTCACTGCCTCTCCTTCGTCC
GCCGCCTCGTCTAAGGTGGATCCTAGCCAACTTGGCGGACTTTCAGCTCA
GTTCTTGCCACCCGAGTACCGCAACACGAACGTTAGCATCGAGGATATAA
AAAGAATATATCGTGAAAAATGCAAGAAGGTAAATGGAGCGGACAACGCA
ACCTTCTACGAAGAAATCGAGCGGGCGGCAGCCAAGATGAGCACCTGCAT
CAGCGGGGTGGTCAATCTGACGGCTCTGCAGGAGGAGATGGATGTGGCGA
GGCCGAACGGCGACTTGGACACCGTGTTTAGCAAATACTGTCTCAAGGCA
CCGGAGGCAGAGGCCTGCGTCAAGGAGTTCAACGACAAGGCGCAGCATTG
CTTGACCCCCGAGGAGAAGCGCCACCAGGAGACGGTTACCCGAATTGGAG
CGTCCGTTTTGGGATTCGCCTGTTCGCGTGGCGGCGATCAGATTGCCCTC
TTCATTGCCGAGCAGGGACCCGAGTGCCTGGAGGCCAACAAGGAAGCCAT
TAGCAATTGCCTCAATCAATCCTTTCATCAGTACATTCCCAAGGATGGCC
AAGTTCCGGACCTGATGAGCCGCCCAGAGCTCCTTTTCTCACCCACCCAC
TGCGTGGACCTGCAGCGCTTCGAGGCCTGTGTCATCCATCATTTGGAGCA
GTGCACGCAGATCACCACCGCTAATATCGTTCAGTCCGTCTTCCGTTTCG
TGAAGAACGAGACCGACTGCCAGGCTTGGATGCAGGCACGTGCGAACGAG
AAGCCCATTCTGATGGCCGCCTCCAGCAACAACACAGCCCCTGGACTCGC
CTACTCCCTGGCCGGCACTCTTTTGGGCGCCACAATACTCCTGATACTCC
CCTGAAAGCTTTCTAGACCAT
BS26551.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:25:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11378-RC | 939 | CG11378-PC | 1..939 | 17..955 | 4695 | 100 | Plus |
| CG11378-RB | 939 | CG11378-PB | 1..939 | 17..955 | 4695 | 100 | Plus |
| CG11378-RA | 939 | CG11378-PA | 1..939 | 17..955 | 4695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:25:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11378-RC | 2256 | CG11378-RC | 99..1039 | 16..956 | 4705 | 100 | Plus |
| CG11378-RB | 1698 | CG11378-RB | 598..1538 | 16..956 | 4705 | 100 | Plus |
| CG11378-RA | 1199 | CG11378-RA | 99..1039 | 16..956 | 4705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:25:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1171815..1172580 | 191..956 | 3830 | 100 | Plus |
| X | 23542271 | X | 1171523..1171698 | 16..191 | 880 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:25:41 has no hits.
BS26551.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:32 Download gff for
BS26551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11378-RA | 96..1033 | 17..954 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:57:41 Download gff for
BS26551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11378-RA | 100..1037 | 17..954 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:00:41 Download gff for
BS26551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11378-RA | 100..1037 | 17..954 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:00:41 Download gff for
BS26551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1171524..1171698 | 17..191 | 100 | -> | Plus |
| X | 1171816..1172578 | 192..954 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:57:41 Download gff for
BS26551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1065557..1065731 | 17..191 | 100 | -> | Plus |
| arm_X | 1065849..1066611 | 192..954 | 100 | | Plus |
BS26551.pep Sequence
Translation from 16 to 954
> BS26551.pep
MNKYGMVGVCLLAALGALLLEVTASPSSAASSKVDPSQLGGLSAQFLPPE
YRNTNVSIEDIKRIYREKCKKVNGADNATFYEEIERAAAKMSTCISGVVN
LTALQEEMDVARPNGDLDTVFSKYCLKAPEAEACVKEFNDKAQHCLTPEE
KRHQETVTRIGASVLGFACSRGGDQIALFIAEQGPECLEANKEAISNCLN
QSFHQYIPKDGQVPDLMSRPELLFSPTHCVDLQRFEACVIHHLEQCTQIT
TANIVQSVFRFVKNETDCQAWMQARANEKPILMAASSNNTAPGLAYSLAG
TLLGATILLILP*
BS26551.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11378-PC | 312 | CG11378-PC | 1..312 | 1..312 | 1614 | 100 | Plus |
| CG11378-PB | 312 | CG11378-PB | 1..312 | 1..312 | 1614 | 100 | Plus |
| CG11378-PA | 312 | CG11378-PA | 1..312 | 1..312 | 1614 | 100 | Plus |
| CG14629-PA | 319 | CG14629-PA | 17..315 | 13..308 | 571 | 40.2 | Plus |
| CG9917-PB | 301 | CG9917-PB | 9..273 | 14..288 | 506 | 38.6 | Plus |
