Clone BS26555 Report

Search the DGRC for BS26555

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:265
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptImpL1-RA
Protein status:BS26555.pep: gold
Sequenced Size:1058

Clone Sequence Records

BS26555.complete Sequence

1058 bp assembled on 2011-08-26

GenBank Submission: KX805534

> BS26555.complete
GAAGTTATCAGTCGACATGAGGCCATACCAAGTAGTTTGCATCGTAGCAG
TAGCAGCTCTGCTGCTTTTGGAGGCGATTCCCGCGGATGCAAAGCGGCGC
AAGCACAAGGGCTCCGATCATCACTATGAAAAGTCTGATCCCCACAAGAC
CAAGACAAAGACCAAGTGGTCTAGCTCCACGGATTTGGCTGGAAACACTC
CAATTTCCACCGAAGAGCACGGCTACTATGTAAAGCGCACCTTTGCGGCT
CCCGGTGAGATTGGAGCCGCACAGAAGCGTCTAAGTCCCCCCTATTTGGC
CATTCCCATCGCCTGGTTCAGCTGTGAGTCGGGCCAGAAGAATTGCCAGT
CTTCCAATTCCGCGGCTATCAACAGTGCCGCGCAGTCCTTGAGCGAGGGC
TATCTGTGCGACGATGATTGCGATGAACTGTACGAGCCCATCTGCGGCAG
GACCACCTCAGAGGTGGCCGTTTTCTACAACAAGTGCAAGTTGGGTGTAG
CCAAGTGCCGATCCCACGGTCTTTGGACGGACTTCGCCTATGCCGAGTGC
CAGGCGAAATATCCGCAGGAAACTGCCTATGCCGACAAGAAGTTCCGGTC
ATCGCCTTATTTCCGGGATGCGGCCATCGTGGAGCAATTGAAGCTGGAGG
AGGAGAAGCGTAAGCAGGAGGAGGAACAACACAAGCTGGAGAAGGAGCAA
AAGAAGAAGGAGAAGGCTGAGAAAAATAAGAACGAGAAGGACAGCAGCGA
AAGCAGCGAGGAGAAGGATGACCAAAAGGAAAACAAGCAGAAGGATCCCC
TTTCCCTAATGCCACAGAAGAAAGTGGAATCCACCCAGAAGCCAGTGCCA
GTTCCTATTCAAGTAGCAGTTCCAAAACCAGTTTCAGTTTTGGAGCCTGC
AAAGACGACCGAGGACATCGCTATGCCGCCTATGCCACTGAAGGACACTC
CCACGCCCAAACCTCTGGAGATCGCGCCCCTTCACCAGCAGACCCAACCC
AAGGGCAAGGACATTGATAGGCTCAAGTACCAAGTAGCTTAGAAGCTTTC
TAGACCAT

BS26555.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:25:57
Subject Length Description Subject Range Query Range Score Percent Strand
ImpL1-RA 1026 CG10717-PA 1..1026 17..1042 5130 100 Plus
ImpL1-RC 1023 CG10717-PC 1..1023 17..1042 5050 99.7 Plus
ImpL1-RB 1101 CG10717-PB 104..1101 45..1042 4990 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:25:58
Subject Length Description Subject Range Query Range Score Percent Strand
ImpL1-RA 1160 CG10717-RA 39..1068 15..1044 5150 100 Plus
ImpL1-RC 1157 CG10717-RC 39..1065 15..1044 5070 99.7 Plus
ImpL1-RB 1230 CG10717-RB 139..1138 45..1044 5000 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:25:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13382908..13383907 45..1044 5000 100 Plus
Blast to na_te.dros performed 2014-11-26 22:25:56
Subject Length Description Subject Range Query Range Score Percent Strand
TART-C 11124 TART-C TARTC 11124bp 8767..8891 641..759 117 56.8 Plus

BS26555.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:33 Download gff for BS26555.complete
Subject Subject Range Query Range Percent Splice Strand
ImpL1-RA 49..1074 17..1042 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:57:49 Download gff for BS26555.complete
Subject Subject Range Query Range Percent Splice Strand
ImpL1-RA 41..1066 17..1042 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:00:51 Download gff for BS26555.complete
Subject Subject Range Query Range Percent Splice Strand
ImpL1-RA 41..1066 17..1042 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:00:51 Download gff for BS26555.complete
Subject Subject Range Query Range Percent Splice Strand
3L 13382805..13382835 17..47 100 -> Plus
3L 13382911..13383905 48..1042 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:57:49 Download gff for BS26555.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13375905..13375935 17..47 100 -> Plus
arm_3L 13376011..13377005 48..1042 100   Plus

BS26555.pep Sequence

Translation from 16 to 1041

> BS26555.pep
MRPYQVVCIVAVAALLLLEAIPADAKRRKHKGSDHHYEKSDPHKTKTKTK
WSSSTDLAGNTPISTEEHGYYVKRTFAAPGEIGAAQKRLSPPYLAIPIAW
FSCESGQKNCQSSNSAAINSAAQSLSEGYLCDDDCDELYEPICGRTTSEV
AVFYNKCKLGVAKCRSHGLWTDFAYAECQAKYPQETAYADKKFRSSPYFR
DAAIVEQLKLEEEKRKQEEEQHKLEKEQKKKEKAEKNKNEKDSSESSEEK
DDQKENKQKDPLSLMPQKKVESTQKPVPVPIQVAVPKPVSVLEPAKTTED
IAMPPMPLKDTPTPKPLEIAPLHQQTQPKGKDIDRLKYQVA*

BS26555.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:12
Subject Length Description Subject Range Query Range Score Percent Strand
ImpL1-PA 341 CG10717-PA 1..341 1..341 1797 100 Plus
ImpL1-PC 340 CG10717-PC 1..340 1..341 1781 99.7 Plus
ImpL1-PB 366 CG10717-PB 1..366 1..341 1761 93.2 Plus