BS26555.complete Sequence
1058 bp assembled on 2011-08-26
GenBank Submission: KX805534
> BS26555.complete
GAAGTTATCAGTCGACATGAGGCCATACCAAGTAGTTTGCATCGTAGCAG
TAGCAGCTCTGCTGCTTTTGGAGGCGATTCCCGCGGATGCAAAGCGGCGC
AAGCACAAGGGCTCCGATCATCACTATGAAAAGTCTGATCCCCACAAGAC
CAAGACAAAGACCAAGTGGTCTAGCTCCACGGATTTGGCTGGAAACACTC
CAATTTCCACCGAAGAGCACGGCTACTATGTAAAGCGCACCTTTGCGGCT
CCCGGTGAGATTGGAGCCGCACAGAAGCGTCTAAGTCCCCCCTATTTGGC
CATTCCCATCGCCTGGTTCAGCTGTGAGTCGGGCCAGAAGAATTGCCAGT
CTTCCAATTCCGCGGCTATCAACAGTGCCGCGCAGTCCTTGAGCGAGGGC
TATCTGTGCGACGATGATTGCGATGAACTGTACGAGCCCATCTGCGGCAG
GACCACCTCAGAGGTGGCCGTTTTCTACAACAAGTGCAAGTTGGGTGTAG
CCAAGTGCCGATCCCACGGTCTTTGGACGGACTTCGCCTATGCCGAGTGC
CAGGCGAAATATCCGCAGGAAACTGCCTATGCCGACAAGAAGTTCCGGTC
ATCGCCTTATTTCCGGGATGCGGCCATCGTGGAGCAATTGAAGCTGGAGG
AGGAGAAGCGTAAGCAGGAGGAGGAACAACACAAGCTGGAGAAGGAGCAA
AAGAAGAAGGAGAAGGCTGAGAAAAATAAGAACGAGAAGGACAGCAGCGA
AAGCAGCGAGGAGAAGGATGACCAAAAGGAAAACAAGCAGAAGGATCCCC
TTTCCCTAATGCCACAGAAGAAAGTGGAATCCACCCAGAAGCCAGTGCCA
GTTCCTATTCAAGTAGCAGTTCCAAAACCAGTTTCAGTTTTGGAGCCTGC
AAAGACGACCGAGGACATCGCTATGCCGCCTATGCCACTGAAGGACACTC
CCACGCCCAAACCTCTGGAGATCGCGCCCCTTCACCAGCAGACCCAACCC
AAGGGCAAGGACATTGATAGGCTCAAGTACCAAGTAGCTTAGAAGCTTTC
TAGACCAT
BS26555.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:25:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpL1-RA | 1026 | CG10717-PA | 1..1026 | 17..1042 | 5130 | 100 | Plus |
ImpL1-RC | 1023 | CG10717-PC | 1..1023 | 17..1042 | 5050 | 99.7 | Plus |
ImpL1-RB | 1101 | CG10717-PB | 104..1101 | 45..1042 | 4990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:25:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpL1-RA | 1160 | CG10717-RA | 39..1068 | 15..1044 | 5150 | 100 | Plus |
ImpL1-RC | 1157 | CG10717-RC | 39..1065 | 15..1044 | 5070 | 99.7 | Plus |
ImpL1-RB | 1230 | CG10717-RB | 139..1138 | 45..1044 | 5000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:25:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 13382908..13383907 | 45..1044 | 5000 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 22:25:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TART-C | 11124 | TART-C TARTC 11124bp | 8767..8891 | 641..759 | 117 | 56.8 | Plus |
BS26555.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:33 Download gff for
BS26555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL1-RA | 49..1074 | 17..1042 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:57:49 Download gff for
BS26555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL1-RA | 41..1066 | 17..1042 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:00:51 Download gff for
BS26555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL1-RA | 41..1066 | 17..1042 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:00:51 Download gff for
BS26555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 13382805..13382835 | 17..47 | 100 | -> | Plus |
3L | 13382911..13383905 | 48..1042 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:57:49 Download gff for
BS26555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 13375905..13375935 | 17..47 | 100 | -> | Plus |
arm_3L | 13376011..13377005 | 48..1042 | 100 | | Plus |
BS26555.pep Sequence
Translation from 16 to 1041
> BS26555.pep
MRPYQVVCIVAVAALLLLEAIPADAKRRKHKGSDHHYEKSDPHKTKTKTK
WSSSTDLAGNTPISTEEHGYYVKRTFAAPGEIGAAQKRLSPPYLAIPIAW
FSCESGQKNCQSSNSAAINSAAQSLSEGYLCDDDCDELYEPICGRTTSEV
AVFYNKCKLGVAKCRSHGLWTDFAYAECQAKYPQETAYADKKFRSSPYFR
DAAIVEQLKLEEEKRKQEEEQHKLEKEQKKKEKAEKNKNEKDSSESSEEK
DDQKENKQKDPLSLMPQKKVESTQKPVPVPIQVAVPKPVSVLEPAKTTED
IAMPPMPLKDTPTPKPLEIAPLHQQTQPKGKDIDRLKYQVA*
BS26555.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpL1-PA | 341 | CG10717-PA | 1..341 | 1..341 | 1797 | 100 | Plus |
ImpL1-PC | 340 | CG10717-PC | 1..340 | 1..341 | 1781 | 99.7 | Plus |
ImpL1-PB | 366 | CG10717-PB | 1..366 | 1..341 | 1761 | 93.2 | Plus |