BS26561.complete Sequence
782 bp assembled on 2011-08-30
GenBank Submission: KX800411
> BS26561.complete
GAAGTTATCAGTCGACATGAAAAAAATAATTAATACATCAAAGCCAAAGC
GCAAGTCCACTTCCATGAAAGTGGAGGAGACTAAGCTAGACGAGGCGCGC
TGGGGTAAGCCGCAGACAAAGGAAGGTGAGTCTGCAAATGGGATAGCAAA
TCCCTCAAATGACGATAAAAAGGAGCTGGCCAATTTCAAAGCCACCTTCA
ATTCCTGGGCCCCCGAGAAGAAACGCGAGAAGATGCACAAGGTAGGCGTC
ATCTTAATATCCAACATACCCAAGGACATGGACGGGGACTGCCTGAAGGA
AATCATGAACTTGCACAGCGTCGTCGGCAGAGTTTACGTGCAGCCGGAAA
CGCTGTCAAGTTTCAAGACAAAGAAGAACATGCGTAAGGGCTGGGTGGAG
TTCATTTCGAAAAGTGGGGCCAAAAAAATCGCTCTAGAGCTGAACAATAA
GCCTATAACCGATGGCAAGTCGTCCCGATTCCGTGGCTTGCTGTGGAAAA
TGAAGTTCCTGCCACGCTTCAAGTGGTACTATCTAACCGATCGCATGGAC
TACGAGCTGGCGGTTTGCAAAGTTCGCGTATGGTCGCAGGCCCGCAAGCG
GGCCACCTTCTGGTACGATCCCGACCAGATGGAGTATTTCAAGAAGCAAG
TGAAGAAGATGAAGAAGATGAAGAAGGTCAAGGAAGCGGAGATGGCTACC
AGGAATGCGGAGATGGCTGCCAAGAAAGCGGAGATGGCTGCCAAGAAATT
GAAGAAGTCTGCCTGAAAGCTTTCTAGACCAT
BS26561.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:59:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6999-RA | 702 | CG6999-PA | 1..702 | 65..766 | 3510 | 100 | Plus |
| CG32706-RA | 693 | CG32706-PA | 1..693 | 65..766 | 3235 | 97.7 | Plus |
| CG32708-RA | 720 | CG32708-PA | 1..363 | 17..388 | 515 | 77.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6999-RA | 875 | CG6999-RA | 57..806 | 17..766 | 3750 | 100 | Plus |
| CG32706-RA | 872 | CG32706-RA | 68..808 | 17..766 | 3475 | 97.9 | Plus |
| CG32708-RA | 855 | CG32708-RA | 54..416 | 17..388 | 515 | 77.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9088839..9089245 | 360..766 | 2035 | 100 | Plus |
| X | 23542271 | X | 9087612..9088009 | 360..766 | 1835 | 97.3 | Plus |
| X | 23542271 | X | 9088423..9088767 | 17..361 | 1725 | 100 | Plus |
| X | 23542271 | X | 9087196..9087540 | 17..361 | 1650 | 98.6 | Plus |
| X | 23542271 | X | 9085985..9086320 | 17..361 | 470 | 77 | Plus |
| X | 23542271 | X | 9086448..9086626 | 387..565 | 355 | 79.9 | Plus |
| X | 23542271 | X | 22152963..22153083 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22147910..22148030 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22158008..22158128 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22251703..22251823 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22167776..22167896 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22187491..22187611 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22192394..22192514 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22197295..22197415 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22143179..22143299 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22202304..22202424 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22212449..22212569 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22217500..22217620 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22226694..22226814 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22231691..22231811 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22236686..22236806 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22241693..22241813 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22246721..22246841 | 106..223 | 195 | 79.3 | Plus |
| X | 23542271 | X | 22163044..22163164 | 106..223 | 180 | 78.5 | Plus |
| X | 23542271 | X | 22172762..22172882 | 106..223 | 180 | 78.5 | Plus |
| X | 23542271 | X | 22177626..22177746 | 106..223 | 180 | 78.5 | Plus |
| X | 23542271 | X | 22182614..22182734 | 106..223 | 180 | 78.5 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:59:15 has no hits.
BS26561.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-30 10:31:57 Download gff for
BS26561.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6999-RA | 57..805 | 17..765 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:41:04 Download gff for
BS26561.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6999-RA | 57..805 | 17..765 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:15:34 Download gff for
BS26561.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6999-RA | 57..805 | 17..765 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:15:34 Download gff for
BS26561.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9088423..9088765 | 17..359 | 100 | -> | Plus |
| X | 9088839..9089244 | 360..765 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:41:04 Download gff for
BS26561.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8982456..8982798 | 17..359 | 100 | -> | Plus |
| arm_X | 8982872..8983277 | 360..765 | 100 | | Plus |
BS26561.pep Sequence
Translation from 16 to 765
> BS26561.pep
MKKIINTSKPKRKSTSMKVEETKLDEARWGKPQTKEGESANGIANPSNDD
KKELANFKATFNSWAPEKKREKMHKVGVILISNIPKDMDGDCLKEIMNLH
SVVGRVYVQPETLSSFKTKKNMRKGWVEFISKSGAKKIALELNNKPITDG
KSSRFRGLLWKMKFLPRFKWYYLTDRMDYELAVCKVRVWSQARKRATFWY
DPDQMEYFKKQVKKMKKMKKVKEAEMATRNAEMAAKKAEMAAKKLKKSA*
BS26561.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:01:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6999-PA | 233 | CG6999-PA | 1..233 | 17..249 | 1222 | 100 | Plus |
| CG32706-PA | 230 | CG32706-PA | 1..230 | 17..249 | 1151 | 96.1 | Plus |
| CG32708-PA | 239 | CG32708-PA | 1..234 | 1..225 | 559 | 54.2 | Plus |
| CG41562-PA | 213 | CG41562-PA | 1..208 | 1..234 | 360 | 40.9 | Plus |
| CG40813-PB | 213 | CG40813-PB | 1..207 | 1..233 | 356 | 40.6 | Plus |
