BS26565.complete Sequence
2114 bp assembled on 2011-09-19
GenBank Submission: KX801944
> BS26565.complete
GAAGTTATCAGTCGACATGTTGGACGATGACAACTCAGATCTGCTGGTCT
GTGCATCGGAGATGCAGGAAGACCGATTATACTTTGTGGCCTTCAAGAAG
AACATCAAGCCAAAGAACACGGTCAACACCCACTACTTCAGCGTCGATGA
GGAATTCATCTATGAGAACTTCTACAATGACTTTGGTCCGCTCAACATAT
GCATGCTCTACAGATACTGCATGAAACTGAACACCAAGCTGAATGCCAAG
TGCCATGCCAACAAAAAGATAGTTCACTACACCTCCATGAATCCGGCCAA
GCGGTTGAACGCGGCCTATCTGATTGGTTCGTATGCAATAATCTACCTTA
ACAAGACACCACAAGAGGCATATCGGCCGCTGGTCGCTGGCGAGATTCCT
GCCTACACGCGCTTTTGTGACGCCAGCTACGGACCTAGCAACTTTAAGAT
TTCGTTGCTGGACTGCCTGAATGCTGTGCACAAAGGCCTGCAGGCGGGAT
TCTTTAATTTCAACGACTTTGATGCTGAGGAGTATGAGTATTTCGAGCGC
GTGGAGAACGGCGACTTTAACTGGATTGTGCCCCAAAAGTTTATAGCGTT
TTGCGGGCCCCATCAGAAGAGCAAGACGCTGCCGAATGGATATCCGTGCC
ATGCACCTGAGCGCTACTTTAGCTATTTTCGGGATAATAATGTGACAACA
GTGATTCGGCTGAATGCCAAAGTCTATCACGCATCGTCCTTTGAGAACGC
TGGTTTCGATCACAAGGATTTGTTCTTCATCGATGGCAGCACGCCCAGCG
ATGCCATCATGAAGAAGTTCCTCTCCATTTGTGAGACGACAAAGGGAGCC
ATTGCAGTTCACTGCAAAGCGGGCTTGGGACGCACGGGCAGCCTGATAGG
GGCATATATCATGAAGCATTACGGATTCACTGCTCTGGAGGCCATAGCCT
GGCTAAGGCTTTGCCGGCCGGGATCGGTGATTGGACATCAGCAGCAGTGG
ATGGAAGACAAACAAAGCTGGCTGTGGTCGGAGGGCGAACGAATGCGCCG
GCGCACTTCGCTTCCCATCCTCCAGCATACGTACGGTATCAACAGCCTGG
AGCTGAAGAAAAAACTGGCCTCGGCTGCCGCCGATTCCACAGAGCACGTC
GATCTGCTTTTAACCCGAGTGAAGGGCATTTCTCAGCGGGTAGATACGAT
GCACCTGAATGACCAGGATAACTTAGATGCAGCTTGTACGGATCAAACGG
ATGAGGAACTCTCGGAGCAGCTGCGATTGGAGCGGGACGAGAGAGCGCTC
TATCAATCCGTTGAGGATCCCAATTGCAATAATAGCGATGACAACGATAC
GGACACGATCAGTGCACCAGCGGATCCGCCGCCTACCTCCAGCTATACAA
TATCCACACGGCGTAGGAAATCTCCATCAGGCGCGAACAAACCGACAGTA
ATAGCCACATCCCTGAGGCGCCTGGTTAATCCCAATGCCAATCGCAGTGG
ATTGAGTACGGCATCTGGAGTTTATCCCACTCCTGAGTTGGCCAGCTGCA
CGGAGAAGAAGTTGCGCAAGCCAAGTGCAAATGTCTTCGAGGCAGCCCGA
CACACGATTGCGTCCACCGTCAGGATGACACAAACGGCGCTCGAAAAGAA
GCAGGCCCAGACGCAGGGCGACAAGCTGAATCAGATCAAGGCGCTGCGAA
GGCATCACTCGCGATCCGTTAATGTGAACAGCAATAGCGAACAGGAATCG
AACGTGAGGCATACGAGAGCTCGATCCCAACCGTTCCGGAACAATAACAA
TGGAGTGGGTGGAAATACAGCGATGGCTGCCTTGAAGCCCACTTCCTCCT
GCTTGCCAACTGGCACAGGGACAGCCGCTCTTTTGGCCAACAATCTGAAC
AACAATAATGACTGCGGTATTGGGACTAGCGGCAGTAGCAATAATAACCA
CAACAACAACAACAACAACAGTAATCTAAGCAACTCCCTGAATAACTATA
ACAACAACAACAATACAACTAACAATATTTTGGCCAGTTCGGGGAGCAGT
CGCACCCGCAGCCTGGCGCTCTATAGCAAAAGACACAAGCCGGCTTAGAA
GCTTTCTAGACCAT
BS26565.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:16:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cdc14-RB | 2082 | CG7134-PB | 1..2082 | 17..2098 | 10410 | 100 | Plus |
| cdc14-RC | 2103 | CG7134-PC | 1..2066 | 17..2082 | 10330 | 100 | Plus |
| cdc14-RD | 3159 | CG7134-PD | 1..2070 | 17..2083 | 10270 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:16:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cdc14-RB | 3285 | CG7134-RB | 591..2672 | 17..2098 | 10410 | 100 | Plus |
| cdc14-RC | 3985 | CG7134-RC | 591..2656 | 17..2082 | 10330 | 100 | Plus |
| cdc14-RD | 4568 | CG7134-RD | 591..2660 | 17..2083 | 10270 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:16:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7805060..7805788 | 1737..1009 | 3645 | 100 | Minus |
| 2L | 23513712 | 2L | 7805853..7806523 | 1008..338 | 3355 | 100 | Minus |
| 2L | 23513712 | 2L | 7804571..7804917 | 2082..1736 | 1735 | 100 | Minus |
| 2L | 23513712 | 2L | 7806653..7806924 | 341..70 | 1345 | 99.6 | Minus |
| 2L | 23513712 | 2L | 7806990..7807044 | 71..17 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:16:54 has no hits.
BS26565.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-19 10:43:08 Download gff for
BS26565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cdc14-RB | 590..2666 | 22..2098 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:17:08 Download gff for
BS26565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cdc14-RB | 596..2672 | 22..2098 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:17:41 Download gff for
BS26565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cdc14-RB | 596..2672 | 22..2098 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:17:41 Download gff for
BS26565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7803028..7803043 | 2083..2098 | 100 | <- | Minus |
| 2L | 7804571..7804915 | 1738..2082 | 100 | <- | Minus |
| 2L | 7805060..7805788 | 1009..1737 | 100 | <- | Minus |
| 2L | 7805853..7806523 | 338..1008 | 100 | <- | Minus |
| 2L | 7806657..7806922 | 72..337 | 100 | <- | Minus |
| 2L | 7806990..7807039 | 22..71 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:17:08 Download gff for
BS26565.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7803028..7803043 | 2083..2098 | 100 | <- | Minus |
| arm_2L | 7804571..7804915 | 1738..2082 | 100 | <- | Minus |
| arm_2L | 7805060..7805788 | 1009..1737 | 100 | <- | Minus |
| arm_2L | 7805853..7806523 | 338..1008 | 100 | <- | Minus |
| arm_2L | 7806657..7806922 | 72..337 | 100 | <- | Minus |
| arm_2L | 7806990..7807039 | 22..71 | 100 | | Minus |
BS26565.pep Sequence
Translation from 16 to 2097
> BS26565.pep
MLDDDNSDLLVCASEMQEDRLYFVAFKKNIKPKNTVNTHYFSVDEEFIYE
NFYNDFGPLNICMLYRYCMKLNTKLNAKCHANKKIVHYTSMNPAKRLNAA
YLIGSYAIIYLNKTPQEAYRPLVAGEIPAYTRFCDASYGPSNFKISLLDC
LNAVHKGLQAGFFNFNDFDAEEYEYFERVENGDFNWIVPQKFIAFCGPHQ
KSKTLPNGYPCHAPERYFSYFRDNNVTTVIRLNAKVYHASSFENAGFDHK
DLFFIDGSTPSDAIMKKFLSICETTKGAIAVHCKAGLGRTGSLIGAYIMK
HYGFTALEAIAWLRLCRPGSVIGHQQQWMEDKQSWLWSEGERMRRRTSLP
ILQHTYGINSLELKKKLASAAADSTEHVDLLLTRVKGISQRVDTMHLNDQ
DNLDAACTDQTDEELSEQLRLERDERALYQSVEDPNCNNSDDNDTDTISA
PADPPPTSSYTISTRRRKSPSGANKPTVIATSLRRLVNPNANRSGLSTAS
GVYPTPELASCTEKKLRKPSANVFEAARHTIASTVRMTQTALEKKQAQTQ
GDKLNQIKALRRHHSRSVNVNSNSEQESNVRHTRARSQPFRNNNNGVGGN
TAMAALKPTSSCLPTGTGTAALLANNLNNNNDCGIGTSGSSNNNHNNNNN
NSNLSNSLNNYNNNNNTTNNILASSGSSRTRSLALYSKRHKPA*
BS26565.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cdc14-PB | 693 | CG7134-PB | 1..693 | 1..693 | 3667 | 100 | Plus |
| cdc14-PC | 700 | CG7134-PC | 1..689 | 1..689 | 3643 | 100 | Plus |
| cdc14-PE | 690 | CG7134-PE | 1..690 | 1..689 | 3631 | 99.9 | Plus |
| cdc14-PD | 1052 | CG7134-PD | 1..690 | 1..689 | 3631 | 99.9 | Plus |
| cdc14-PA | 1052 | CG7134-PA | 1..690 | 1..689 | 3631 | 99.9 | Plus |
