BS26592.complete Sequence
1646 bp assembled on 2011-09-19
GenBank Submission: KX803885
> BS26592.complete
GAAGTTATCAGTCGACATGGAGAGCACGACAAAGGTGAAGGTGAACGGCT
TTGTGGAATCGACGTCGTCTTCAGCGGCGCCGGCAATCCAGACAAAGAGT
ACCACCGGATTCGATGCCGAGCTGCAGGATGGGCTGAGTTGTAAGGAACT
GTTCCAGAACGGTGAGGGACTCACCTACAACGACTTTCTCATACTGCCCG
GCTACATAGACTTCACCGCCGAGGAGGTCGATCTCAGTTCGCCACTGACC
AAGTCGCTGACATTGCGAGCACCGCTGGTTAGTTCGCCCATGGACACGGT
AACCGAATCGGAGATGGCCATCGCCATGGCGCTGTGTGGTGGCATTGGCA
TCATCCATCACAACTGCACGCCGGAATACCAGGCGTTGGAGGTGCACAAG
GTTAAGAAGTACAAGCACGGCTTCATGCGCGACCCCTCGGTGATGTCGCC
CACGAATACGGTGGGGGATGTGTTGGAGGCGCGGCGGAAGAACGGATTCA
CCGGCTATCCGGTCACCGAGAACGGCAAACTTGGCGGCAAGCTGCTGGGC
ATGGTCACGTCGCGAGACATTGACTTCCGCGAGAACCAGCCGGAGGTCCT
GCTGGCCGACATCATGACCACCGAACTGGTCACCGCTCCCAATGGCATCA
ATCTGCCCACGGCAAACGCTATTCTCGAGAAGAGCAAGAAGGGCAAACTG
CCGATTGTGAATCAGGCCGGCGAACTGGTGGCCATGATTGCCCGCACGGA
TTTGAAGAAGGCCCGCTCCTACCCGAATGCCTCCAAGGACTCCAATAAGC
AGCTCCTCGTCGGCGCTGCCATCGGAACGCGATCGGAGGACAAGGCGCGC
CTGGCTCTGCTGGTGGCCAACGGCGTGGACGTTATCATCCTTGATTCATC
GCAGGGCAACTCCGTCTACCAGGTGGAGATGATCAAGTACATTAAGGAGA
CCTATCCCGAACTACAGGTCATTGGTGGCAATGTGGTAACACGTGCCCAG
GCCAAAAATCTCATTGATGCCGGCGTCGATGGACTGCGTGTGGGCATGGG
TTCCGGTTCCATCTGCATCACCCAGGAGGTGATGGCCTGCGGATGTCCTC
AGGCCACTGCTGTCTACCAGGTGTCCACGTACGCTCGCCAATTCGGAGTG
CCAGTGATCGCGGACGGAGGCATCCAGTCCATTGGACACATTGTGAAGGC
TATTGCATTGGGAGCCAGCGCTGTAATGATGGGCTCCCTGCTGGCGGGCA
CATCGGAGGCACCGGGCGAGTACTTCTTCTCCGACGGAGTGCGCCTTAAG
AAGTACCGCGGCATGGGCTCCCTGGAGGCCATGGAGCGCGGCGATGCCAA
GGGCGCTGCCATGTCGCGCTACTACCACAACGAGATGGATAAAATGAAGG
TGGCACAGGGCGTCAGTGGCAGCATCGTGGACAAGGGCAGTGTGCTGCGC
TATCTACCCTATTTGGAGTGCGGACTGCAGCACAGTTGTCAGGACATCGG
TGCTAACTCCATTAATAAATTGAGGGATATGATCTATAATGGCCAACTGC
GCTTCATGAAGCGCACCCATTCCGCTCAACTGGAAGGCAATGTCCATGGC
CTCTTCAGCTACGAGAAGCGTCTCTTCTAAAAGCTTTCTAGACCAT
BS26592.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:31:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ras-RD | 1614 | CG1799-PD | 1..1614 | 17..1630 | 8070 | 100 | Plus |
| ras-RE | 1614 | CG1799-PE | 1..1614 | 17..1630 | 8070 | 100 | Plus |
| ras-RA | 1614 | CG1799-PA | 1..1614 | 17..1630 | 8070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:31:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ras-RD | 2810 | CG1799-RD | 303..1916 | 17..1630 | 8070 | 100 | Plus |
| ras-RE | 2415 | CG1799-RE | 199..1812 | 17..1630 | 8070 | 100 | Plus |
| ras-RA | 2519 | CG1799-RA | 303..1916 | 17..1630 | 8070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:31:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10746420..10747072 | 331..983 | 3265 | 100 | Plus |
| X | 23542271 | X | 10747485..10748027 | 983..1525 | 2715 | 100 | Plus |
| X | 23542271 | X | 10745820..10745983 | 17..180 | 820 | 100 | Plus |
| X | 23542271 | X | 10746072..10746226 | 177..331 | 760 | 99.4 | Plus |
| X | 23542271 | X | 10748096..10748203 | 1523..1630 | 540 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:31:08 has no hits.
BS26592.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-19 10:43:13 Download gff for
BS26592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ras-RA | 1010..2621 | 17..1628 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:19:01 Download gff for
BS26592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ras-RC | 105..1716 | 17..1628 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:23:55 Download gff for
BS26592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ras-RA | 303..1914 | 17..1628 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:23:55 Download gff for
BS26592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10745820..10745983 | 17..180 | 100 | -> | Plus |
| X | 10746076..10746226 | 181..331 | 100 | -> | Plus |
| X | 10746421..10747072 | 332..983 | 100 | -> | Plus |
| X | 10747486..10748026 | 984..1524 | 100 | -> | Plus |
| X | 10748098..10748201 | 1525..1628 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:19:01 Download gff for
BS26592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10639853..10640016 | 17..180 | 100 | -> | Plus |
| arm_X | 10640109..10640259 | 181..331 | 100 | -> | Plus |
| arm_X | 10640454..10641105 | 332..983 | 100 | -> | Plus |
| arm_X | 10641519..10642059 | 984..1524 | 100 | -> | Plus |
| arm_X | 10642131..10642234 | 1525..1628 | 100 | | Plus |
BS26592.pep Sequence
Translation from 16 to 1629
> BS26592.pep
MESTTKVKVNGFVESTSSSAAPAIQTKSTTGFDAELQDGLSCKELFQNGE
GLTYNDFLILPGYIDFTAEEVDLSSPLTKSLTLRAPLVSSPMDTVTESEM
AIAMALCGGIGIIHHNCTPEYQALEVHKVKKYKHGFMRDPSVMSPTNTVG
DVLEARRKNGFTGYPVTENGKLGGKLLGMVTSRDIDFRENQPEVLLADIM
TTELVTAPNGINLPTANAILEKSKKGKLPIVNQAGELVAMIARTDLKKAR
SYPNASKDSNKQLLVGAAIGTRSEDKARLALLVANGVDVIILDSSQGNSV
YQVEMIKYIKETYPELQVIGGNVVTRAQAKNLIDAGVDGLRVGMGSGSIC
ITQEVMACGCPQATAVYQVSTYARQFGVPVIADGGIQSIGHIVKAIALGA
SAVMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMERGDAKGAAMS
RYYHNEMDKMKVAQGVSGSIVDKGSVLRYLPYLECGLQHSCQDIGANSIN
KLRDMIYNGQLRFMKRTHSAQLEGNVHGLFSYEKRLF*
BS26592.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ras-PD | 537 | CG1799-PD | 1..537 | 1..537 | 2728 | 100 | Plus |
| ras-PE | 537 | CG1799-PE | 1..537 | 1..537 | 2728 | 100 | Plus |
| ras-PA | 537 | CG1799-PA | 1..537 | 1..537 | 2728 | 100 | Plus |
| ras-PC | 537 | CG1799-PC | 1..537 | 1..537 | 2728 | 100 | Plus |
