BS26609.complete Sequence
971 bp assembled on 2011-08-29
GenBank Submission: KX806152
> BS26609.complete
GAAGTTATCAGTCGACATGGGACATTCGTCAAATTTGTTTTGGTTCTTTG
TTTTCGTATTAATCACAAAAGTATACGCCGCATTGTCCAATCCATTGTCA
TCAAAAATCGAAGTATACAATCAGCCTGAAGTTACACCCGAAAAAGAAAG
AGCCAAAGTGAGAAACTATTTCGTGCATGAGCCATACGGGCCCAACACAT
ATTCCTTTGGCTATGAGATTAATGATCCGCAGACGCAAAACTCTCAGTTT
CGAGAAGAAAAAAGATTTGTGAATGGCAGCATTCAAGGTAGCTACGGGTA
TGCAAGGCCAGATGGACGCATTGAAGTCACCAAATATATGGCGAAAGAGG
ATGGCGGTTACTCGGCCCAGATTCAGATTTTTAAAGCAGGCGATGAGAAA
GTCAAATCAGTTTGGCCCACCGAAAGACCTGATATATTAGTGGAGAGAAG
CAAATCCGATGCTCCTTCAAATATCACCTGGGATCCAAAGAGCCATCTCA
ACGTGACCGTCTCTCATGTGGCGGATCATGTGGCCCAGCAGCTGAAGCAG
CAACATGGCCTCGACCTAAACCACATCGATGTGACCAAGGATGTGCTTAA
ACCAGCGGTGCTCGATGTTATCCAGGGCAAGGAACCAACTAAGGGTCGCC
CTGTTCAGAATCTAATTCCTCAGCATTTTCCCATAGTTCCCTTCCAACTG
CCGGCGGATCAAGAAACCACCAAGGCCACCACAGCGGAGCCCCAGAAAAC
TGAAAGTTCAAAATACCACAGGGCGCAATCCAACAATGCCGAGAAGGCTC
AACAAGTCGAGGAGCCGGAGGCAAGATTACCGCCACCCGGGCCACTGGTC
AATAGCAGTCCAAGCGATGGAAATTGGCAACGGCGAACCATTGAGGCAAA
TCGCCGTGAATTCCTGGCCAATTTACCCAACCTAAGTGAGGCCAGGCCAG
AGTAAAAGCTTTCTAGACCAT
BS26609.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:53:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34462-RA | 939 | CG34462-PA | 1..939 | 17..955 | 4695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34462-RA | 1157 | CG34462-RA | 97..1037 | 16..956 | 4705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8329349..8330117 | 188..956 | 3845 | 100 | Plus |
3L | 28110227 | 3L | 8329160..8329299 | 50..189 | 700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:53:45 has no hits.
BS26609.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-29 17:14:10 Download gff for
BS26609.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34462-RA | 1..937 | 17..953 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:37:43 Download gff for
BS26609.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34462-RA | 98..1034 | 17..953 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:12:51 Download gff for
BS26609.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34462-RA | 98..1034 | 17..953 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:12:51 Download gff for
BS26609.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8329160..8329298 | 50..188 | 100 | -> | Plus |
3L | 8328680..8328712 | 17..49 | 100 | -> | Plus |
3L | 8329350..8330114 | 189..953 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:37:43 Download gff for
BS26609.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8322260..8322398 | 50..188 | 100 | -> | Plus |
arm_3L | 8321780..8321812 | 17..49 | 100 | -> | Plus |
arm_3L | 8322450..8323214 | 189..953 | 100 | | Plus |
BS26609.pep Sequence
Translation from 16 to 954
> BS26609.pep
MGHSSNLFWFFVFVLITKVYAALSNPLSSKIEVYNQPEVTPEKERAKVRN
YFVHEPYGPNTYSFGYEINDPQTQNSQFREEKRFVNGSIQGSYGYARPDG
RIEVTKYMAKEDGGYSAQIQIFKAGDEKVKSVWPTERPDILVERSKSDAP
SNITWDPKSHLNVTVSHVADHVAQQLKQQHGLDLNHIDVTKDVLKPAVLD
VIQGKEPTKGRPVQNLIPQHFPIVPFQLPADQETTKATTAEPQKTESSKY
HRAQSNNAEKAQQVEEPEARLPPPGPLVNSSPSDGNWQRRTIEANRREFL
ANLPNLSEARPE*
BS26609.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:00:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34462-PA | 312 | CG34462-PA | 1..312 | 1..312 | 1647 | 100 | Plus |