Clone BS26609 Report

Search the DGRC for BS26609

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:266
Well:9
Vector:pDNR-Dual
Associated Gene/TranscriptCG34462-RA
Protein status:BS26609.pep: full length peptide match
Sequenced Size:971

Clone Sequence Records

BS26609.complete Sequence

971 bp assembled on 2011-08-29

GenBank Submission: KX806152

> BS26609.complete
GAAGTTATCAGTCGACATGGGACATTCGTCAAATTTGTTTTGGTTCTTTG
TTTTCGTATTAATCACAAAAGTATACGCCGCATTGTCCAATCCATTGTCA
TCAAAAATCGAAGTATACAATCAGCCTGAAGTTACACCCGAAAAAGAAAG
AGCCAAAGTGAGAAACTATTTCGTGCATGAGCCATACGGGCCCAACACAT
ATTCCTTTGGCTATGAGATTAATGATCCGCAGACGCAAAACTCTCAGTTT
CGAGAAGAAAAAAGATTTGTGAATGGCAGCATTCAAGGTAGCTACGGGTA
TGCAAGGCCAGATGGACGCATTGAAGTCACCAAATATATGGCGAAAGAGG
ATGGCGGTTACTCGGCCCAGATTCAGATTTTTAAAGCAGGCGATGAGAAA
GTCAAATCAGTTTGGCCCACCGAAAGACCTGATATATTAGTGGAGAGAAG
CAAATCCGATGCTCCTTCAAATATCACCTGGGATCCAAAGAGCCATCTCA
ACGTGACCGTCTCTCATGTGGCGGATCATGTGGCCCAGCAGCTGAAGCAG
CAACATGGCCTCGACCTAAACCACATCGATGTGACCAAGGATGTGCTTAA
ACCAGCGGTGCTCGATGTTATCCAGGGCAAGGAACCAACTAAGGGTCGCC
CTGTTCAGAATCTAATTCCTCAGCATTTTCCCATAGTTCCCTTCCAACTG
CCGGCGGATCAAGAAACCACCAAGGCCACCACAGCGGAGCCCCAGAAAAC
TGAAAGTTCAAAATACCACAGGGCGCAATCCAACAATGCCGAGAAGGCTC
AACAAGTCGAGGAGCCGGAGGCAAGATTACCGCCACCCGGGCCACTGGTC
AATAGCAGTCCAAGCGATGGAAATTGGCAACGGCGAACCATTGAGGCAAA
TCGCCGTGAATTCCTGGCCAATTTACCCAACCTAAGTGAGGCCAGGCCAG
AGTAAAAGCTTTCTAGACCAT

BS26609.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:53:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG34462-RA 939 CG34462-PA 1..939 17..955 4695 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG34462-RA 1157 CG34462-RA 97..1037 16..956 4705 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:44
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8329349..8330117 188..956 3845 100 Plus
3L 28110227 3L 8329160..8329299 50..189 700 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:53:45 has no hits.

BS26609.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-29 17:14:10 Download gff for BS26609.complete
Subject Subject Range Query Range Percent Splice Strand
CG34462-RA 1..937 17..953 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:37:43 Download gff for BS26609.complete
Subject Subject Range Query Range Percent Splice Strand
CG34462-RA 98..1034 17..953 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:12:51 Download gff for BS26609.complete
Subject Subject Range Query Range Percent Splice Strand
CG34462-RA 98..1034 17..953 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:12:51 Download gff for BS26609.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8329160..8329298 50..188 100 -> Plus
3L 8328680..8328712 17..49 100 -> Plus
3L 8329350..8330114 189..953 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:37:43 Download gff for BS26609.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8322260..8322398 50..188 100 -> Plus
arm_3L 8321780..8321812 17..49 100 -> Plus
arm_3L 8322450..8323214 189..953 100   Plus

BS26609.pep Sequence

Translation from 16 to 954

> BS26609.pep
MGHSSNLFWFFVFVLITKVYAALSNPLSSKIEVYNQPEVTPEKERAKVRN
YFVHEPYGPNTYSFGYEINDPQTQNSQFREEKRFVNGSIQGSYGYARPDG
RIEVTKYMAKEDGGYSAQIQIFKAGDEKVKSVWPTERPDILVERSKSDAP
SNITWDPKSHLNVTVSHVADHVAQQLKQQHGLDLNHIDVTKDVLKPAVLD
VIQGKEPTKGRPVQNLIPQHFPIVPFQLPADQETTKATTAEPQKTESSKY
HRAQSNNAEKAQQVEEPEARLPPPGPLVNSSPSDGNWQRRTIEANRREFL
ANLPNLSEARPE*

BS26609.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:00:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG34462-PA 312 CG34462-PA 1..312 1..312 1647 100 Plus