BS26652.complete Sequence
1012 bp assembled on 2011-08-26
GenBank Submission: KX802681
> BS26652.complete
GAAGTTATCAGTCGACATGCGCGTCTACCTGGCCCTGCCGCTCCTGCTGC
TGGGCATCGGCCTCAGTTTGGCCCAGTACCAGTATCAAGCGCCCCACCAA
ACCCTCGCCCAGCAATTCGCCGACGTGGTGGATGTGGTCGATCCTGCAGA
ACAATCTATCAAAGCAGTGCGACCACCGAAGAGCCGCAATCAGTGCACCG
CCAAGCAGAACTGCTTCTGCGGCACTCCGAATGTCAACCGTATCGTGGGC
GGCCAGCAGGTGCGCTCCAACAAGTATCCTTGGACCGCCCAATTGGTAAA
GGGTCGTCATTATCCCCGCCTCTTCTGCGGCGGTTCCCTAATCAATGATC
GCTATGTGCTGACCGCCGCCCATTGTGTGCATGGGAACAGGGATCAGATC
ACCATTCGCCTGCTCCAGATCGACAGATCCTCCCGGGATCCCGGCATTGT
GCGCAAGGTCGTCCAGACCACTGTGCATCCTAACTACGATCCCAACCGGA
TTGTCAACGATGTGGCGCTGCTCAAGCTGGAGTCCCCTGTTCCACTGACT
GGAAACATGCGTCCAGTCTGTCTGCCCGAGGCCAATCATAACTTTGATGG
CAAGACCGCTGTGGTTGCTGGCTGGGGTTTGATCAAGGAGGGCGGCGTCA
CCTCCAACTATCTGCAGGAGGTCAATGTGCCCGTCATCACCAACGCGCAG
TGTCGCCAGACGCGCTACAAGGACAAGATTGCCGAGGTGATGCTCTGCGC
CGGATTGGTGCAGCAGGGTGGCAAGGACGCCTGCCAGGGCGACAGTGGTG
GCCCACTGATCGTCAACGAGGGTCGCTACAAGCTGGCCGGCGTGGTGTCC
TTCGGCTACGGATGTGCACAGAAGAATGCGCCGGGTGTCTACGCCAGGGT
GAGCAAGTTCCTGGACTGGATCCGTAAGAACACCGCCGACGGCTGCTACT
GCCAGAGTTAGAAGCTTTCTAGACCCATTCGTGTTGGCGCCGCGGAAACG
GGGGGGGGGGTT
BS26652.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:15:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3355-RA | 945 | CG3355-PA | 1..945 | 17..961 | 4725 | 100 | Plus |
| CG3355-RB | 651 | CG3355-PB | 1..592 | 17..608 | 2960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:15:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3355-RA | 1096 | CG3355-RA | 36..981 | 17..962 | 4730 | 100 | Plus |
| CG3355-RB | 1399 | CG3355-RB | 88..679 | 17..608 | 2960 | 100 | Plus |
| CG3355-RB | 1399 | CG3355-RB | 945..1299 | 608..962 | 1775 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:15:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4651765..4652157 | 216..608 | 1965 | 100 | Plus |
| 2L | 23513712 | 2L | 4652423..4652777 | 608..962 | 1775 | 100 | Plus |
| 2L | 23513712 | 2L | 4651490..4651688 | 17..215 | 995 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:15:41 has no hits.
BS26652.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:18 Download gff for
BS26652.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RA | 88..1038 | 17..968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:52:10 Download gff for
BS26652.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RA | 36..986 | 17..968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:55:50 Download gff for
BS26652.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RA | 36..986 | 17..968 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:55:50 Download gff for
BS26652.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4651765..4652156 | 216..607 | 100 | -> | Plus |
| 2L | 4651490..4651688 | 17..215 | 100 | -> | Plus |
| 2L | 4652423..4652782 | 608..968 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:52:10 Download gff for
BS26652.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4651490..4651688 | 17..215 | 100 | -> | Plus |
| arm_2L | 4651765..4652156 | 216..607 | 100 | -> | Plus |
| arm_2L | 4652423..4652782 | 608..968 | 99 | | Plus |
BS26652.pep Sequence
Translation from 16 to 960
> BS26652.pep
MRVYLALPLLLLGIGLSLAQYQYQAPHQTLAQQFADVVDVVDPAEQSIKA
VRPPKSRNQCTAKQNCFCGTPNVNRIVGGQQVRSNKYPWTAQLVKGRHYP
RLFCGGSLINDRYVLTAAHCVHGNRDQITIRLLQIDRSSRDPGIVRKVVQ
TTVHPNYDPNRIVNDVALLKLESPVPLTGNMRPVCLPEANHNFDGKTAVV
AGWGLIKEGGVTSNYLQEVNVPVITNAQCRQTRYKDKIAEVMLCAGLVQQ
GGKDACQGDSGGPLIVNEGRYKLAGVVSFGYGCAQKNAPGVYARVSKFLD
WIRKNTADGCYCQS*
BS26652.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3355-PA | 314 | CG3355-PA | 1..314 | 1..314 | 1673 | 100 | Plus |
| CG3355-PB | 216 | CG3355-PB | 1..197 | 1..197 | 1046 | 100 | Plus |
| CG4613-PC | 374 | CG4613-PC | 122..372 | 58..312 | 834 | 60.7 | Plus |
| CG4613-PB | 374 | CG4613-PB | 122..372 | 58..312 | 834 | 60.7 | Plus |
| CG18735-PA | 364 | CG18735-PA | 58..321 | 43..312 | 630 | 47.1 | Plus |
