Clone BS26659 Report

Search the DGRC for BS26659

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:266
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptCG4553-RA
Protein status:BS26659.pep: full length peptide match
Sequenced Size:1124

Clone Sequence Records

BS26659.complete Sequence

1124 bp assembled on 2011-08-26

GenBank Submission: KX802454

> BS26659.complete
GAAGTTATCAGTCGACATGACTGCCCGCATGATCCAACGCGGCCTGCACA
CTGCTCGCTCCTGTCTGTTGGCGAGAGCTCCTCGTCGCGCAAATCCTGGA
CTAGGTTACCAGCTGGAGCAGCTGCAGGAGCACCCGGAAAAGAGCAGCGA
AGCTAGCGAGGATTACGCCGATCTGGAGTCGGATTTCATGGACGTGCAGA
AGACCCATCGGCAGTACGAGAGGGAGCAGCAGCAGCATCGCGACCGCATC
CGTCAGTTTATGATAAAGCACAAGTATTTCCGAGACGCCAAGTTGCCCAA
TCTCTTGCTTCATGCCGAAAAGGAGCAGATGCGCCTGCTGCACGAGCGAG
ATCCCGAGGAATGGAGCGTTGAGCGATTGGCCGAAAGTTTTCCCGCCACT
CCGGACATTGTGCAGAAAATTCTGCGGGCCAAGTGGCGACCGAGAAGTGT
GCAAAGGATACGCTCCCACGATGAAACCGTCATTAAAAACTGGCAGCTTT
TAGGGACGGGAAAGGGTGACTTCAGTATCCCACCGTCTCTTCTCCAGCAT
CTGCAGAAATTCGCCGAGCGAAGGTGGCAGGATCTGCGGGAGCTTAAAAT
CCAGGATTGGCCCACAAAATCACAACTACCGACTCCGCAAGGCAACGAAT
TCCGCAAACTGCTGGGCAGCAGTAGTAAAACAACAGAGGAGATGCCTACA
CCACAAATCCCATCCGGCTATGAAGCTCCACCCTCTGCTGCCGAAGATGA
AACCTATTTGTTGGACAAAATCCGTAATAAAAAGAAGATGCGGCTGCAGG
AGCTTAAGGAATTGCAGCTCGTTGAGTCTGCGCCCGCAGTTCCAGAGGAA
ATGAAGCGGCCCATCGAGAATCCCAGTGGCACCGGATTCCTGCCCAGTTT
CGTGCCCAAGTTTGCGAGCAGCGAGATTGTGATCAGTGCCGCGGATCAGC
GCAAGTATGAAATAACCCAGGTGAAAACACGCATTGTTATTCCCCGGAAA
CTGCATCGCCAAGGAGCCACTTACCGGGTGGAGGATGCCTATTACGATGA
CGATGGAGAGCTGCTCTACCGAGTGCCTGGAATGACCAGAGCCAGTGGTG
ATAAATAGAAGCTTTCTAGACCAT

BS26659.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:15:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG4553-RA 1092 CG4553-PA 1..1092 17..1108 5460 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:15:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG4553-RA 1280 CG4553-RA 63..1154 17..1108 5460 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:15:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25475762..25476853 1108..17 5460 100 Minus
Blast to na_te.dros performed on 2014-11-26 22:15:15 has no hits.

BS26659.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:18 Download gff for BS26659.complete
Subject Subject Range Query Range Percent Splice Strand
CG4553-RA 63..1148 17..1102 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:51:56 Download gff for BS26659.complete
Subject Subject Range Query Range Percent Splice Strand
CG4553-RA 63..1148 17..1102 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:55:36 Download gff for BS26659.complete
Subject Subject Range Query Range Percent Splice Strand
CG4553-RA 63..1148 17..1102 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:55:36 Download gff for BS26659.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25475768..25476853 17..1102 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:51:56 Download gff for BS26659.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21301490..21302575 17..1102 100   Minus

BS26659.pep Sequence

Translation from 16 to 1107

> BS26659.pep
MTARMIQRGLHTARSCLLARAPRRANPGLGYQLEQLQEHPEKSSEASEDY
ADLESDFMDVQKTHRQYEREQQQHRDRIRQFMIKHKYFRDAKLPNLLLHA
EKEQMRLLHERDPEEWSVERLAESFPATPDIVQKILRAKWRPRSVQRIRS
HDETVIKNWQLLGTGKGDFSIPPSLLQHLQKFAERRWQDLRELKIQDWPT
KSQLPTPQGNEFRKLLGSSSKTTEEMPTPQIPSGYEAPPSAAEDETYLLD
KIRNKKKMRLQELKELQLVESAPAVPEEMKRPIENPSGTGFLPSFVPKFA
SSEIVISAADQRKYEITQVKTRIVIPRKLHRQGATYRVEDAYYDDDGELL
YRVPGMTRASGDK*

BS26659.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG4553-PA 363 CG4553-PA 1..363 1..363 1891 100 Plus