BS26701.complete Sequence
944 bp assembled on 2011-08-31
GenBank Submission: KX804579
> BS26701.complete
GAAGTTATCAGTCGACATGGAAGAAAGTCAGCCAAGGTATGGCGCTATGT
GGACATTCAAGCTGGTGGCACCATACGTAATTGGCGGCTACCTATGCGGC
CTCGCGGTAACGCTCGCATGGAACTGGTGGCAGCTGGGCCACTTGGTTCT
GGGTCTTAATCTCACCTTCGCGATTCCGGTGGCGCTTGTTCTGGCGGTCT
TTTACAGCAGGCCCGTAAGGTGCATTGTGACTTTGGCCCTTCCCTCGCTG
TGCAGCTCTCGGGGAAGGGCGTTCCTCATCAGCCTTGCCTTTGTTATTGC
CGCAGTTGGGCCTACGGCGAACATTCTAGCCAATTTGAAGGTGATGCTCC
GCAGCCTCGCTTGCGGACAGGAGCTATTGCGTCAGGCGCTTGGCCAGATG
TTGGACGTAATACTGGAGCCGGTGAATGCCATCCAGCTAGCGGTGGATCT
CTTGATGCGGGAAGTGCGTCGGGTGCTCAAGCTGGCCATGGTAGTGCTGT
TACGCATTCAGGACCAATTGATCGCAATTACAAGCATTTTTAAGTTTATC
CGCCGCAGAAAGCGTAATGAGTTTAACCACACACGGAATGTGAAGCACAC
CAGAAACTACACTTGGCTGAACAATAGATTCTCCTGTTTAATGTGCATGT
GCTCCTGCTGCTCATCCTGTCAAAGCACTGAGAGGTGCACCATATGTGGC
CGATCTCTGACTCTTTCAAATCGTAACCCCTGCGACACTCCTGGATGCAA
AGGGGTTTATTGCGGTAAATGCTTTGAAAAGTCACACAATAAGTGTTGTC
TGTGCAATCGACCAGTGGATTATGGTGATTTTTCCGACGTTACTGAAGTA
GACGACTCTTCGGACTATTCTGAAAAAGAGTCTTTTAGCGAAAGGCAGTA
CAGGAAGACCTGTGGAGGACAACGCTAGAAGCTTTCTAGACCAT
BS26701.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:32:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6845-RD | 912 | CG6845-PD | 1..912 | 17..928 | 4560 | 100 | Plus |
| CG6845-RC | 2019 | CG6845-PC | 1..514 | 17..530 | 2570 | 100 | Plus |
| CG6845-RC | 2019 | CG6845-PC | 1621..2019 | 530..928 | 1995 | 100 | Plus |
| CG6845-RE | 1005 | CG6845-PE | 607..1005 | 530..928 | 1995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:32:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6845-RD | 1069 | CG6845-RD | 71..983 | 16..928 | 4565 | 100 | Plus |
| CG6845-RE | 2294 | CG6845-RE | 71..585 | 16..530 | 2575 | 100 | Plus |
| CG6845-RC | 2176 | CG6845-RC | 71..585 | 16..530 | 2575 | 100 | Plus |
| CG6845-RE | 2294 | CG6845-RE | 1810..2208 | 530..928 | 1995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:32:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 146770..147082 | 218..530 | 1565 | 100 | Plus |
| 3L | 28110227 | 3L | 146503..146708 | 16..221 | 1030 | 100 | Plus |
| 3L | 28110227 | 3L | 148462..148645 | 531..714 | 920 | 100 | Plus |
| 3L | 28110227 | 3L | 148704..148841 | 715..852 | 690 | 100 | Plus |
| 3L | 28110227 | 3L | 148895..148970 | 853..928 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:32:54 has no hits.
BS26701.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-31 16:54:38 Download gff for
BS26701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6845-RD | 52..963 | 17..928 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:56:33 Download gff for
BS26701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6845-RD | 72..983 | 17..928 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:27:35 Download gff for
BS26701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6845-RD | 72..983 | 17..928 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:27:35 Download gff for
BS26701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 148462..148645 | 531..714 | 100 | -> | Plus |
| 3L | 148704..148841 | 715..852 | 100 | -> | Plus |
| 3L | 148895..148970 | 853..928 | 100 | | Plus |
| 3L | 146504..146706 | 17..219 | 100 | -> | Plus |
| 3L | 146772..147082 | 220..530 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:56:33 Download gff for
BS26701.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 148462..148645 | 531..714 | 100 | -> | Plus |
| arm_3L | 148704..148841 | 715..852 | 100 | -> | Plus |
| arm_3L | 148895..148970 | 853..928 | 100 | | Plus |
| arm_3L | 146504..146706 | 17..219 | 100 | -> | Plus |
| arm_3L | 146772..147082 | 220..530 | 100 | -> | Plus |
BS26701.pep Sequence
Translation from 16 to 927
> BS26701.pep
MEESQPRYGAMWTFKLVAPYVIGGYLCGLAVTLAWNWWQLGHLVLGLNLT
FAIPVALVLAVFYSRPVRCIVTLALPSLCSSRGRAFLISLAFVIAAVGPT
ANILANLKVMLRSLACGQELLRQALGQMLDVILEPVNAIQLAVDLLMREV
RRVLKLAMVVLLRIQDQLIAITSIFKFIRRRKRNEFNHTRNVKHTRNYTW
LNNRFSCLMCMCSCCSSCQSTERCTICGRSLTLSNRNPCDTPGCKGVYCG
KCFEKSHNKCCLCNRPVDYGDFSDVTEVDDSSDYSEKESFSERQYRKTCG
GQR*
BS26701.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:04:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6845-PD | 303 | CG6845-PD | 1..303 | 1..303 | 1611 | 100 | Plus |
| CG6845-PC | 672 | CG6845-PC | 1..176 | 1..176 | 856 | 97.7 | Plus |
| CG6845-PC | 672 | CG6845-PC | 541..672 | 172..303 | 758 | 100 | Plus |
| CG6845-PE | 334 | CG6845-PE | 203..334 | 172..303 | 758 | 100 | Plus |
| CG32320-PD | 767 | CG32320-PD | 100..259 | 20..176 | 211 | 33.1 | Plus |
| CG32320-PD | 767 | CG32320-PD | 636..751 | 181..288 | 156 | 31.1 | Plus |
