Clone BS26707 Report

Search the DGRC for BS26707

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:267
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG31777-RA
Protein status:BS26707.pep: gold
Sequenced Size:362

Clone Sequence Records

BS26707.complete Sequence

362 bp assembled on 2011-08-31

GenBank Submission: KX801758

> BS26707.complete
GAAGTTATCAGTCGACATGTCTCGACACAAGCCCGCGTCGGTGGTGCTAA
CGCTGCTGTTGGTGGTGCTGTTGGCGCTGATCCACCACCGCCGCATAGAT
GCCAGATTCGTGCCCGGTCCGCCTTCAATACCCAGTATTTGCAAAAAACC
ACCGCCACGTTCGGAGGGCGTTTGTGCCATTGATATCGAGGGATACTATT
ACGATCCGATAACATTTGACTGCAAGATGTACAAGATCGGGGCATGCCAC
TTGATTCGTGGCCAGAGTTTCGGCAGTCAACAGGATTGCATTTCCACCTG
CATCCATGGGATACGCCGGAATCATGACTTTTATGTGAACGAGTAAAAGC
TTTCTAGACCAT

BS26707.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:34:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG31777-RA 330 CG31777-PA 1..330 17..346 1650 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:34:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG31777-RA 383 CG31777-RA 17..354 9..346 1660 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:34:21
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3706580..3706791 346..135 1060 100 Minus
2L 23513712 2L 3706920..3707047 136..9 610 98.4 Minus
Blast to na_te.dros performed 2014-11-27 01:34:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6847..6893 83..37 127 74.5 Minus

BS26707.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-31 16:54:40 Download gff for BS26707.complete
Subject Subject Range Query Range Percent Splice Strand
CG31777-RA 22..349 17..344 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:57:13 Download gff for BS26707.complete
Subject Subject Range Query Range Percent Splice Strand
CG31777-RA 25..352 17..344 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:28:06 Download gff for BS26707.complete
Subject Subject Range Query Range Percent Splice Strand
CG31777-RA 25..352 17..344 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:28:06 Download gff for BS26707.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3706582..3706791 135..344 100 <- Minus
2L 3706922..3707039 17..134 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:57:13 Download gff for BS26707.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3706582..3706791 135..344 100 <- Minus
arm_2L 3706922..3707039 17..134 100   Minus

BS26707.pep Sequence

Translation from 16 to 345

> BS26707.pep
MSRHKPASVVLTLLLVVLLALIHHRRIDARFVPGPPSIPSICKKPPPRSE
GVCAIDIEGYYYDPITFDCKMYKIGACHLIRGQSFGSQQDCISTCIHGIR
RNHDFYVNE*

BS26707.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:05:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG31777-PA 109 CG31777-PA 1..109 1..109 594 100 Plus