BS26907.complete Sequence
554 bp assembled on 2011-09-16
GenBank Submission: KX804441
> BS26907.complete
GAAGTTATCAGTCGACATGCTTCACAAGCTGACTTGGGTTCTAATATTTA
TACCTGCTTTTCGAGCTGCCGATCCCATTTGCTCTCAAAGGCCGGATGTA
ACTGCCTTGAGAAACTGTTGCAAGCTGCCTAATCTGGACTTTTCGAGTTT
CAACTCCAAGTGCAGTCAGTATTTGGTCAATGGAGTCCACATATCACCTT
GCAGCTTTGAGTGCATCTTTCGAGCGGCGAATGCATTAAATGGCACCCAT
TTGGTTATGGAAAATATCGAAAAGATGATGAAAACCATTTTGGGCTCTGA
TGAATTTGTGCACGTGTATCTGGATGGATTCAGGAGCTGCGGTAATCAGG
AGAAGGTGCTCATTAAGGCAATGAAACGTCGCCGTGTTCCCATCACCGGA
AAATGTGGCTCGATGGCGATAATGTATGGCCTGTGTGCCCATCGATATGT
CTACCGTAATTGCCCGGAAAGCGTGTGGAGCAAGAGTGCCACCTGCAATG
AGGCCAGGGAATACAGCATTCGCTGCGATGACATGTAAAAGCTTTCTAGA
CCAT
BS26907.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:37:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50d-RA | 522 | CG30074-PA | 1..522 | 17..538 | 2610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:37:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50d-RA | 587 | CG30074-RA | 12..538 | 12..538 | 2620 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:37:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14373421..14373759 | 200..538 | 1695 | 100 | Plus |
| 2R | 25286936 | 2R | 14373266..14373361 | 104..199 | 480 | 100 | Plus |
| 2R | 25286936 | 2R | 14373119..14373211 | 12..104 | 450 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:37:08 has no hits.
BS26907.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-16 10:21:29 Download gff for
BS26907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50d-RA | 1..520 | 17..536 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:24:22 Download gff for
BS26907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50d-RA | 17..536 | 17..536 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:01:45 Download gff for
BS26907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50d-RA | 17..536 | 17..536 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:01:45 Download gff for
BS26907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14373124..14373210 | 17..103 | 100 | -> | Plus |
| 2R | 14373266..14373361 | 104..199 | 100 | -> | Plus |
| 2R | 14373421..14373757 | 200..536 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:24:22 Download gff for
BS26907.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10260629..10260715 | 17..103 | 100 | -> | Plus |
| arm_2R | 10260771..10260866 | 104..199 | 100 | -> | Plus |
| arm_2R | 10260926..10261262 | 200..536 | 100 | | Plus |
BS26907.pep Sequence
Translation from 16 to 537
> BS26907.pep
MLHKLTWVLIFIPAFRAADPICSQRPDVTALRNCCKLPNLDFSSFNSKCS
QYLVNGVHISPCSFECIFRAANALNGTHLVMENIEKMMKTILGSDEFVHV
YLDGFRSCGNQEKVLIKAMKRRRVPITGKCGSMAIMYGLCAHRYVYRNCP
ESVWSKSATCNEAREYSIRCDDM*
BS26907.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:22:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50d-PA | 173 | CG30074-PA | 1..173 | 1..173 | 938 | 100 | Plus |
| Obp50c-PC | 185 | CG30072-PC | 1..174 | 1..170 | 286 | 30.5 | Plus |
| Obp50a-PA | 181 | CG30067-PA | 6..169 | 1..170 | 170 | 24.6 | Plus |
