Clone BS26910 Report

Search the DGRC for BS26910

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:269
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptCG42763-RA
Protein status:BS26910.pep: gold
Sequenced Size:608

Clone Sequence Records

BS26910.complete Sequence

608 bp assembled on 2011-09-16

GenBank Submission: KX806011

> BS26910.complete
GAAGTTATCAGTCGACATGATTAAGGAAATATACTTCCAACTCGTCATTG
TTTCGCTGGCTGTACTGTTACCAGCGAATAGTTATCCCCTGGAGCCAAAT
GCGGAAAATGCATGCGAATTTATCAGGAACGTTGCGCGATTTCCAGACGA
TGAGAATGCTTGGTGGGAAAAGAGTAAAAGTTTAGCCAATTCCATTTTGG
AGACCAAAATCAATTATAAAGGATCATACCGTTCCTGTAACCAATATGTT
GCTACCCTACAAAATCTAAAAAATCGTGGAAATGAATTAAATGCATCCAG
TCCTTGGGCACAAATAATTGAATATCTTAACGCATCCTCACAGGAATATG
AAGGTGGTCCGTGTACTGATGAGGAACCCTACAGTTATATATATTCAAGT
AACATTAAAAACATGAAAAACGATATACGCGAATTGAGTCAACATGTGAA
AGATCAAATCGAATATCATAATTTGGTGGCACATATTGATACGAATGTCA
ATACGATCATAAATACATTATCTGGTTTCTCTATTCCGATATTGAAGTAT
TTAACACGGTTTCCTTCGGCAAAGTGTACTCTGCCCAATTGAAAGCTTTC
TAGACCAT

BS26910.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:37:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG42763-RA 576 CG42763-PA 1..576 17..592 2880 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:37:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG42763-RA 660 CG42763-RA 20..595 17..592 2880 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:37:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8144456..8144981 592..67 2630 100 Minus
2L 23513712 2L 8145034..8145088 71..17 260 98.2 Minus
Blast to na_te.dros performed on 2014-11-27 07:37:14 has no hits.

BS26910.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-16 10:21:29 Download gff for BS26910.complete
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 1..575 17..591 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:24:25 Download gff for BS26910.complete
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 20..594 17..591 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:01:46 Download gff for BS26910.complete
Subject Subject Range Query Range Percent Splice Strand
CG42763-RA 20..594 17..591 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:01:46 Download gff for BS26910.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8144457..8144980 68..591 100 <- Minus
2L 8145038..8145088 17..67 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:24:25 Download gff for BS26910.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8144457..8144980 68..591 100 <- Minus
arm_2L 8145038..8145088 17..67 100   Minus

BS26910.pep Sequence

Translation from 16 to 591

> BS26910.pep
MIKEIYFQLVIVSLAVLLPANSYPLEPNAENACEFIRNVARFPDDENAWW
EKSKSLANSILETKINYKGSYRSCNQYVATLQNLKNRGNELNASSPWAQI
IEYLNASSQEYEGGPCTDEEPYSYIYSSNIKNMKNDIRELSQHVKDQIEY
HNLVAHIDTNVNTIINTLSGFSIPILKYLTRFPSAKCTLPN*

BS26910.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:22:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG42763-PA 191 CG42763-PA 1..191 1..191 1006 100 Plus