BS26912.complete Sequence
680 bp assembled on 2011-09-01
GenBank Submission: KX805422
> BS26912.complete
GAAGTTATCAGTCGACATGAGTAATCTGAAACAAAAGGATAGCAAGCCGG
AGGTGGCAGTAACAAAATCAGTGAAAACCTATAAAAAATCAATTGAATAT
GTTAATTCCGACGCCTCCGACATTGAAGAAGATATCAATAGGGCAGAGGA
CGAATACGCCTCATCGTCTGGCTTTGTTAATTTTCTGAGGGACTTTAAGA
AGCGCTACGGAGAATATTACTCGAATAACGAGATAAGACGGGCTGCTGAA
ACCCGATGGAACGAAATGTCATTCCGTCATCGATGCCAGTATTCTGCGGA
ACCATTGGACACTTTTCATGTAGAGCCCAACAGTGTGAGCAGTCTTCAGC
GTTCTAGTGAGGGCGAGCACAGAATGCACTCTGAAATAAGTGGCTGCGCA
GACACTTTCTTCGGTGCCGGTGGCTCCAATAGCTGCACTCCAAGAAAGGA
GAACAAGTGTTCCAAGCCCAGGGTGCGGAAGAGTTGCCCCAAACCACGGG
CGAAAACCTCGAAGCAACGTCGCAGTTGCGGCAAACCGAAGCCCAAGGGC
GCCCGACCCCGGAAGGCATGTCCCCGCCCCAGGAAGAAGATGGAATGCGG
CAAGGCGAAGGCAAAGCCAAGGTGTCTTAAGCCCAAGAGTTCCAAGCCCA
AGTGCTCGATGTAAAAGCTTTCTAGACCAT
BS26912.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:41:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mst77F-RA | 648 | CG3354-PA | 1..648 | 17..664 | 3225 | 99.8 | Plus |
| Mst77Y-9-RA | 645 | CG45769-PA | 1..645 | 17..664 | 2455 | 92.3 | Plus |
| CG45764-RA | 645 | CG45764-PA | 1..645 | 17..664 | 2455 | 92.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:41:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mst77F-RA | 1065 | CG3354-RA | 150..797 | 17..664 | 3225 | 99.8 | Plus |
| Mst77Y-9-RA | 660 | CG45769-RA | 16..660 | 17..664 | 2455 | 92.3 | Plus |
| CG45764-RA | 942 | CG45764-RA | 147..791 | 17..664 | 2455 | 92.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:41:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20817169..20817535 | 664..298 | 1820 | 99.7 | Minus |
| 3L | 28110227 | 3L | 20817596..20817878 | 299..17 | 1415 | 100 | Minus |
| Y | 3667352 | Y | 3341184..3341546 | 298..664 | 1405 | 93.5 | Plus |
| Y | 3667352 | Y | 3289701..3290064 | 298..664 | 1380 | 92.4 | Plus |
| Y | 3667352 | Y | 3358926..3359286 | 300..664 | 1380 | 93.2 | Plus |
| Y | 3667352 | Y | 3285354..3285717 | 298..664 | 1365 | 92.1 | Plus |
| Y | 3667352 | Y | 3302187..3302550 | 298..664 | 1365 | 92.1 | Plus |
| Y | 3667352 | Y | 3336760..3337123 | 298..664 | 1365 | 92.1 | Plus |
| Y | 3667352 | Y | 3371242..3371602 | 300..664 | 1365 | 92.9 | Plus |
| Ymm | 880023 | Ymm | 515756..516116 | 664..300 | 1365 | 92.9 | Minus |
| Y | 3667352 | Y | 3293966..3294329 | 298..664 | 1350 | 91.8 | Plus |
| Y | 3667352 | Y | 3350011..3350374 | 298..664 | 1350 | 91.8 | Plus |
| Y | 3667352 | Y | 3354465..3354828 | 298..664 | 1350 | 91.8 | Plus |
| Y | 3667352 | Y | 3297764..3298126 | 298..664 | 1345 | 92.4 | Plus |
| Y | 3667352 | Y | 3327916..3328279 | 298..664 | 1335 | 91.6 | Plus |
| Y | 3667352 | Y | 3332337..3332699 | 298..664 | 1330 | 92.1 | Plus |
| Y | 3667352 | Y | 3319090..3319442 | 298..664 | 1165 | 89.1 | Plus |
| Y | 3667352 | Y | 3323503..3323855 | 298..664 | 1165 | 89.1 | Plus |
| Y | 3667352 | Y | 3336415..3336697 | 17..299 | 1100 | 92.6 | Plus |
| Y | 3667352 | Y | 3318745..3319027 | 17..299 | 1085 | 92.2 | Plus |
| Y | 3667352 | Y | 3323158..3323440 | 17..299 | 1085 | 92.2 | Plus |
| Y | 3667352 | Y | 3289355..3289637 | 17..299 | 1085 | 92.2 | Plus |
| Y | 3667352 | Y | 3293621..3293903 | 17..299 | 1085 | 92.2 | Plus |
| Y | 3667352 | Y | 3301842..3302124 | 17..299 | 1085 | 92.2 | Plus |
| Y | 3667352 | Y | 3327571..3327853 | 17..299 | 1085 | 92.2 | Plus |
| Y | 3667352 | Y | 3349666..3349948 | 17..299 | 1085 | 92.2 | Plus |
| Y | 3667352 | Y | 3354120..3354402 | 17..299 | 1085 | 92.2 | Plus |
| Y | 3667352 | Y | 3358586..3358868 | 17..299 | 1085 | 92.2 | Plus |
| Y | 3667352 | Y | 3370902..3371184 | 17..299 | 1085 | 92.2 | Plus |
| Ymm | 880023 | Ymm | 516174..516456 | 299..17 | 1085 | 92.2 | Minus |
| Y | 3667352 | Y | 3297419..3297701 | 17..299 | 1055 | 91.5 | Plus |
| Y | 3667352 | Y | 3340839..3341121 | 17..299 | 1055 | 91.5 | Plus |
| Y | 3667352 | Y | 3345262..3345544 | 17..299 | 1055 | 91.5 | Plus |
| Y | 3667352 | Y | 3345663..3345950 | 374..664 | 1030 | 91.1 | Plus |
| Y | 3667352 | Y | 3376297..3376579 | 17..299 | 1025 | 90.8 | Plus |
| Y | 3667352 | Y | 3364784..3365046 | 402..664 | 1015 | 92.4 | Plus |
| Y | 3667352 | Y | 3285012..3285291 | 17..299 | 1005 | 91.2 | Plus |
| Y | 3667352 | Y | 3331995..3332274 | 17..299 | 1005 | 91.2 | Plus |
| Y | 3667352 | Y | 3376698..3376984 | 374..664 | 965 | 90.4 | Plus |
| Y | 3667352 | Y | 3364536..3364742 | 17..226 | 715 | 90.5 | Plus |
| Ymm | 880023 | Ymm | 579088..579274 | 664..477 | 665 | 91.5 | Minus |
| U | 3151297 | U | 1324257..1324400 | 158..17 | 410 | 88.9 | Minus |
| U | 3151297 | U | 973485..973559 | 664..590 | 315 | 94.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:41:53 has no hits.
BS26912.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-01 17:21:00 Download gff for
BS26912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mst77F-RA | 173..818 | 17..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:59:52 Download gff for
BS26912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mst77F-RA | 150..795 | 17..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:30:14 Download gff for
BS26912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mst77F-RA | 150..795 | 17..662 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:30:14 Download gff for
BS26912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20817597..20817878 | 17..298 | 100 | | Minus |
| 3L | 20817171..20817534 | 299..662 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:59:52 Download gff for
BS26912.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20810697..20810978 | 17..298 | 100 | | Minus |
| arm_3L | 20810271..20810634 | 299..662 | 99 | <- | Minus |
BS26912.pep Sequence
Translation from 16 to 663
> BS26912.pep
MSNLKQKDSKPEVAVTKSVKTYKKSIEYVNSDASDIEEDINRAEDEYASS
SGFVNFLRDFKKRYGEYYSNNEIRRAAETRWNEMSFRHRCQYSAEPLDTF
HVEPNSVSSLQRSSEGEHRMHSEISGCADTFFGAGGSNSCTPRKENKCSK
PRVRKSCPKPRAKTSKQRRSCGKPKPKGARPRKACPRPRKKMECGKAKAK
PRCLKPKSSKPKCSM*
BS26912.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:05:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mst77F-PA | 215 | CG3354-PA | 1..215 | 1..215 | 1152 | 100 | Plus |
| Mst77Y-9-PA | 214 | CG45769-PA | 1..214 | 1..215 | 1000 | 88.4 | Plus |
| CG45766-PA | 214 | CG45766-PA | 1..214 | 1..215 | 994 | 87.9 | Plus |
| CG45764-PA | 214 | CG45764-PA | 1..214 | 1..215 | 994 | 87.9 | Plus |
| CG45770-PA | 214 | CG45770-PA | 1..214 | 1..215 | 985 | 87 | Plus |
