BS26914.complete Sequence
1007 bp assembled on 2011-08-31
GenBank Submission: KX802320
> BS26914.complete
GAAGTTATCAGTCGACATGTATCCTGTGAGCTCGCAAAAGAGGTCCTGGA
CATTCGCCAATGAGGGCCAGCTCATGGAGTTCCGCGTGGAGCAGAACAGC
AAGTATATCGAGTCGCACGAGGAGGAGGCGCAGGGTCGCGACCTCAATGA
GCACTTTCTCACGTCGGCGGAGGAGCGCCTGTTGCTGAAGCAGTACGAGA
TCTACCTGTTCGATTTCTGCCGCCGCTTCGAACCGACGATGCCCAAGTGC
GTTGTGGGCACGGCCTTCCACTACTTCAAGCGGTTCTATCTGAACAACTC
CCCCATGGACTATCACCCCAAGGAGATTCTAGCCACATGCGTGTTCGTTG
CCTGCAAAGTTGAGGAGTTCAACGTGTCCATCAACCAGTTCGTGAACAAC
ATCAAGGGCGACAGGAACAAGGCCACCGACATAGTGTTGTCCAATGAATT
ACTGCTGATTGGACAGCTCAACTACTACCTCACCATACACAATCCGTTCA
GACCCATCGAGGGTTTCCTGATAGATATAAAAACTCGCAGCAATATGCAG
AATCCAGATCGTCTGCGGCCACATATTGATAGTTTCATTGATTCCACGTA
CTACTCGGATGCCTGTCTTCTGCATACGCCTTCGCAAATTGCATTGGCTG
CCGTCCTCCACGCGGCCAGCAGAGAGCAAGAGAATCTCGATAGCTATGTG
ACGGATCTTCTGTTTGTCTCCGCCAGGGAGAAGCTACCCGGACTCATAGA
TGCCGTGCGAAAAATTCGCATAATGGTGAAGCAATATCAGCAGCCCGATC
GGGAGAAGGTCAAGGCCATCGAGAAAAAGTTGGACAAGTGCCGAAATCAA
GCCAATAATCCTGATAGCGAACTCTATAAGGAGCGCCTACGCCGATTGTA
CACCGATGAGGATGACATGCCCGCCGAAGATGCCTCATTCCACATTGCAG
ATGTGAGCTCGGACACATCTGCTATGAACATCAGCCAATAGAAGCTTTCT
AGACCAT
BS26914.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:35:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycH-RA | 975 | CG7405-PA | 1..975 | 17..991 | 4845 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:35:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycH-RA | 1065 | CG7405-RA | 10..985 | 17..992 | 4850 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:35:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21822006..21822319 | 17..330 | 1555 | 99.7 | Plus |
| 3L | 28110227 | 3L | 21822657..21822885 | 533..761 | 1145 | 100 | Plus |
| 3L | 28110227 | 3L | 21822396..21822597 | 331..532 | 995 | 99.5 | Plus |
| 3L | 28110227 | 3L | 21823111..21823229 | 874..992 | 595 | 100 | Plus |
| 3L | 28110227 | 3L | 21822941..21823052 | 762..873 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:35:38 has no hits.
BS26914.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-31 16:54:49 Download gff for
BS26914.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycH-RA | 6..980 | 17..991 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:57:39 Download gff for
BS26914.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycH-RA | 10..984 | 17..991 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:28:30 Download gff for
BS26914.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycH-RA | 10..984 | 17..991 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:28:30 Download gff for
BS26914.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21822006..21822319 | 17..330 | 99 | -> | Plus |
| 3L | 21822396..21822597 | 331..532 | 99 | -> | Plus |
| 3L | 21822657..21822885 | 533..761 | 100 | -> | Plus |
| 3L | 21822941..21823052 | 762..873 | 100 | -> | Plus |
| 3L | 21823111..21823228 | 874..991 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:57:39 Download gff for
BS26914.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21815106..21815419 | 17..330 | 99 | -> | Plus |
| arm_3L | 21815496..21815697 | 331..532 | 99 | -> | Plus |
| arm_3L | 21815757..21815985 | 533..761 | 100 | -> | Plus |
| arm_3L | 21816041..21816152 | 762..873 | 100 | -> | Plus |
| arm_3L | 21816211..21816328 | 874..991 | 100 | | Plus |
BS26914.pep Sequence
Translation from 16 to 990
> BS26914.pep
MYPVSSQKRSWTFANEGQLMEFRVEQNSKYIESHEEEAQGRDLNEHFLTS
AEERLLLKQYEIYLFDFCRRFEPTMPKCVVGTAFHYFKRFYLNNSPMDYH
PKEILATCVFVACKVEEFNVSINQFVNNIKGDRNKATDIVLSNELLLIGQ
LNYYLTIHNPFRPIEGFLIDIKTRSNMQNPDRLRPHIDSFIDSTYYSDAC
LLHTPSQIALAAVLHAASREQENLDSYVTDLLFVSAREKLPGLIDAVRKI
RIMVKQYQQPDREKVKAIEKKLDKCRNQANNPDSELYKERLRRLYTDEDD
MPAEDASFHIADVSSDTSAMNISQ*
BS26914.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:05:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycH-PA | 324 | CG7405-PA | 1..324 | 1..324 | 1690 | 100 | Plus |
| CycC-PA | 267 | CG7281-PA | 61..260 | 79..274 | 161 | 26.2 | Plus |
