BS27006.complete Sequence
857 bp assembled on 2011-09-16
GenBank Submission: KX800331
> BS27006.complete
GAAGTTATCAGTCGACATGAAGAGCCAACCCATCCTGATTCTGGCCGTGT
GCCTCTTGGCCCTCTCCGCCGTTTCCGCCATGCCACAGCGTCGGGCGAAG
AGTCAACGCCAGGTGGAGTACTCATCCACACCCTATCCGGCTGCTGGCTT
CCGCCCCAGGGTTCCCTTTAATCTGCCCGGTGAAGTTCAACCCAAGATCG
AGACGGAACCACTGACCACCACCAGTACCACGTCTGCCAGCGAAGTGGAA
ACCCTGGAGAATACCGAGCCACTTAGCACCACCGAGCAGCAGCAGCCGGA
AGCGGGAACGGTAGCGGATTTGGAATTGTCCATCCGCACGCCTGCCAATA
CCTACGGAGCCCCTGAAGAGCAGGATCCCCTCGTGCCGGACACCGTAGTG
GTGGTGGCCCAGGAGCCAGCCCGCGACTTTCAGCCCCCCTCCCTGGATGC
CGTCGAGGACTTTGCCGCCGATGTCACTGTTGCTGCTGATGGCGAGCAGC
CTGTTGCTGATGTCCCTGCCCTGGGCCAAGCGGAGTCGGAGGACGATGAG
CCCGAGGCGGCGGTCAAGGCTGTCACCCCGGCTGGAGCCTATGGACCACC
CGCCGCCACCTACGGTGTGCCTGAGCTGAGCGAGACCGAGAACGAGTTGG
ATCTGGAGGAGTCGCAAGTTGAGCTGGTTGAAGAGGAGGCGGCGGCGGAG
GAGGCGCTGACCAACGAGCTCTCTAGTGGTCGCCTGATCCTCCTGCCCTT
GGGCGCCAGGGGAACACAGTTTGGTCGCCTCATCCTTGCCGTGGAGCAAC
CACGCCAGCGCCTGAGGAGCGAACGACTCAGGCGGATTTAGAAGCTTTCT
AGACCAT
BS27006.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:38:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14564-RA | 825 | CG14564-PA | 1..825 | 17..841 | 4125 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:38:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14564-RA | 890 | CG14564-RA | 1..825 | 17..841 | 4125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:38:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21757155..21757981 | 15..841 | 4135 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 07:38:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6781..6837 | 519..463 | 114 | 66.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6783 | 519..463 | 112 | 70 | Minus |
BS27006.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-16 10:21:31 Download gff for
BS27006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14564-RA | 1..825 | 17..841 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:24:44 Download gff for
BS27006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14564-RA | 1..825 | 17..841 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:02:02 Download gff for
BS27006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14564-RA | 1..825 | 17..841 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:02:02 Download gff for
BS27006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21757157..21757981 | 17..841 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:24:44 Download gff for
BS27006.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21750257..21751081 | 17..841 | 100 | | Plus |
BS27006.pep Sequence
Translation from 16 to 840
> BS27006.pep
MKSQPILILAVCLLALSAVSAMPQRRAKSQRQVEYSSTPYPAAGFRPRVP
FNLPGEVQPKIETEPLTTTSTTSASEVETLENTEPLSTTEQQQPEAGTVA
DLELSIRTPANTYGAPEEQDPLVPDTVVVVAQEPARDFQPPSLDAVEDFA
ADVTVAADGEQPVADVPALGQAESEDDEPEAAVKAVTPAGAYGPPAATYG
VPELSETENELDLEESQVELVEEEAAAEEALTNELSSGRLILLPLGARGT
QFGRLILAVEQPRQRLRSERLRRI*
BS27006.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:22:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14564-PA | 274 | CG14564-PA | 1..274 | 1..274 | 1362 | 100 | Plus |
