BS27011.complete Sequence
377 bp assembled on 2011-10-18
GenBank Submission: KX805443
> BS27011.complete
GAAGTTATCAGTCGACATGATCCCAATAAGCTCATCAAAATTAAATAGGA
AACTGGCAAGTAAACCCTTCCTAAATGAAGGACTACCTGCCAGAAAGTCT
ATCGGTTGTCTTTTTCTTGGCATAATACTTGGAGTTTTTTTAGCCGGAAT
ACTCTTTTACTCGCTGATGAACGAAGACTGCCGGAAAAGTTCGAGGAATA
TAATGAGCATTATTGGAGTGGAAATACCTCAAAACAAAAACGCCACATCG
AAATTGGATACTGCCGCAAAAAATGTAGAAGAGAGTAGCGTAGCGGTTAC
ACAAGAAACCCCTGCTGAATTTAATAAAGCTGATAATAATTCAACAGTTT
CAATGCCCTAAAAGCTTTCTAGACCAT
BS27011.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:15:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43084-RA | 345 | CG43084-PA | 1..345 | 17..361 | 1725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:15:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43084-RA | 450 | CG43084-RA | 40..384 | 17..361 | 1725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:15:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15651043..15651326 | 78..361 | 1420 | 100 | Plus |
3L | 28110227 | 3L | 15650891..15650955 | 17..81 | 325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:15:31 has no hits.
BS27011.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-18 10:25:24 Download gff for
BS27011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43084-RA | 1..343 | 17..359 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:52:04 Download gff for
BS27011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43084-RA | 40..382 | 17..359 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:55:43 Download gff for
BS27011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43084-RA | 40..382 | 17..359 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:55:43 Download gff for
BS27011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15650891..15650954 | 17..80 | 100 | -> | Plus |
3L | 15651046..15651324 | 81..359 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:52:04 Download gff for
BS27011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15643991..15644054 | 17..80 | 100 | -> | Plus |
arm_3L | 15644146..15644424 | 81..359 | 100 | | Plus |
BS27011.pep Sequence
Translation from 16 to 360
> BS27011.pep
MIPISSSKLNRKLASKPFLNEGLPARKSIGCLFLGIILGVFLAGILFYSL
MNEDCRKSSRNIMSIIGVEIPQNKNATSKLDTAAKNVEESSVAVTQETPA
EFNKADNNSTVSMP*
BS27011.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:35:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43084-PA | 114 | CG43084-PA | 1..114 | 1..114 | 566 | 100 | Plus |