BS27101.complete Sequence
572 bp assembled on 2011-08-31
GenBank Submission: KX805612
> BS27101.complete
GAAGTTATCAGTCGACATGAGTGACTTCAGCATCGAGTATATTTTGAACC
GAGCCGGCGACAGATACGTGGGCACCAATGCCTCCTTGGGCGTCCTGCAG
CGACTCCGTGCCAGCTTGCCTTTCCATCCGTACGCCCACCCAGCATCTTA
TGTCTCAAAGGAGTCTGGAGGATCTCCTCCAGCCTCGGCTGCGGAGGCTC
AGATACCCGTCTACGATTGGCTGCAGTACACCCGGTACCATCCGCCCAAG
TTGCCCAGAGCCCTCCGCCAAAATGCGCCCGCCAAAAGGACTCCTGGTCG
CCTGCCCCGCATCCCATTTACTCCGCAGCAGCTGCAGGCCCTGGAAAATG
CCTACAAGGAGTCCAACTATCTGAGCGCCGAGGACGCCAACAAACTAGCC
GACTCCTTGGAGCTGACCAATACGCGAGTGAAGATCTGGTTCCAGAATCG
TAGGGCTCGCGAGCGACGGGAGAAGCGCGAAAAGGACGAGAGTTGCGACT
CCACCTTCTCATCGAACGCCTCCAGTCCGGAACCGGAAATGATCGTTGTA
ACGTGAAAGCTTTCTAGACCAT
BS27101.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:36:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15696-RA | 540 | CG15696-PA | 1..540 | 17..556 | 2640 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:36:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15696-RA | 681 | CG15696-RA | 44..583 | 17..556 | 2640 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:36:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20847111..20847650 | 17..556 | 2640 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:36:16 has no hits.
BS27101.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-31 16:54:50 Download gff for
BS27101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15696-RA | 1..539 | 17..555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:57:54 Download gff for
BS27101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15696-RA | 44..582 | 17..555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:28:41 Download gff for
BS27101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15696-RA | 44..582 | 17..555 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:28:41 Download gff for
BS27101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20847111..20847649 | 17..555 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:57:54 Download gff for
BS27101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16672833..16673371 | 17..555 | 99 | | Plus |
BS27101.pep Sequence
Translation from 16 to 555
> BS27101.pep
MSDFSIEYILNRAGDRYVGTNASLGVLQRLRASLPFHPYAHPASYVSKES
GGSPPASAAEAQIPVYDWLQYTRYHPPKLPRALRQNAPAKRTPGRLPRIP
FTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARER
REKREKDESCDSTFSSNASSPEPEMIVVT*
BS27101.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:05:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15696-PA | 179 | CG15696-PA | 1..179 | 1..179 | 932 | 100 | Plus |
| Dr-PA | 515 | CG1897-PA | 408..478 | 76..151 | 178 | 48.7 | Plus |
| E5-PA | 524 | CG9930-PA | 251..379 | 37..170 | 161 | 33.1 | Plus |
| ems-PA | 494 | CG2988-PA | 349..452 | 54..158 | 158 | 33.6 | Plus |
| scro-PF | 307 | CG17594-PF | 93..169 | 95..171 | 148 | 41.6 | Plus |
