BS27301.complete Sequence
797 bp assembled on 2011-10-18
GenBank Submission: KX804700
> BS27301.complete
GAAGTTATCAGTCGACATGGGATGCCAAAGCTGTACATCCCTAGTGACAC
ATCCTAGTTATACAATTAGGCAACATTATCCAGGTCCTTTAATCACCTAC
GACGGGGAGGCGCGATGTGAGCCGCGTTTTATTCGATTTTCGGACTTAAC
CTTGAGCACAATGGAGCTTATCTTCAATGCTTATGGAGACAATGATGATG
ATGGAACGGATGAAATGAATGAAATGAATGAAGTGTGTGAAAAGAAGGTA
GATGTGGAGGAAAAGTGTGACAAGCAGAGAGAGGAGCCGGCGTGTGGTAA
TCCAAGGAAGATCTTTGGCTGCCAAACAAATGCACCAATGCACAACTGTA
GGTTGAATGGTGGCAGGGAGGAATCCGACTTGGCAGACGATTCACTCGTC
GACAAGGAGCTCCGAGCCCTGGAGGATCGTGCCAGGGGTATATACGAAAT
ACATATCGAATCTTTTCCAGATTCGCCGTCTTGGGACTGCCTGAAACCTG
CGGAGAAACTGCGCTTTCAATGGAAAGCTTCTACTGGAGATGATCTGATG
AAAAGTCCTTATGAAAATTTCGCATTGAGTTTTACCAGAAGTTTCCTCGA
AGCTTTTCCCCTTGCCACATGTGCCACTGTTCGAAAGGAGGAAAAAATCG
CGTGGTGCAAGTTAGATCGCTGCCAGCGAATGCCGTTCATACTGCAGGCT
CTACTGTACCACGTCGCCATCGGTGCCATCGATCCCGAAGATCACTGTGC
TGTTCGTGAACTTTTTCACAAGTTGAGATAGAAGCTTTCTAGACCAT
BS27301.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:13:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31010-RB | 765 | CG31010-PB | 1..765 | 17..781 | 3825 | 100 | Plus |
| CG31010-RA | 765 | CG31010-PA | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:13:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31010-RB | 1360 | CG31010-RB | 216..981 | 17..782 | 3830 | 100 | Plus |
| CG31010-RA | 1295 | CG31010-RA | 151..916 | 17..782 | 3830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:13:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30705141..30705906 | 782..17 | 3830 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:13:15 has no hits.
BS27301.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-18 10:25:15 Download gff for
BS27301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31010-RA | 123..887 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:50:52 Download gff for
BS27301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31010-RA | 151..915 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:54:38 Download gff for
BS27301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31010-RA | 151..915 | 17..781 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:54:38 Download gff for
BS27301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30705142..30705906 | 17..781 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:50:52 Download gff for
BS27301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26530864..26531628 | 17..781 | 100 | | Minus |
BS27301.pep Sequence
Translation from 16 to 780
> BS27301.pep
MGCQSCTSLVTHPSYTIRQHYPGPLITYDGEARCEPRFIRFSDLTLSTME
LIFNAYGDNDDDGTDEMNEMNEVCEKKVDVEEKCDKQREEPACGNPRKIF
GCQTNAPMHNCRLNGGREESDLADDSLVDKELRALEDRARGIYEIHIESF
PDSPSWDCLKPAEKLRFQWKASTGDDLMKSPYENFALSFTRSFLEAFPLA
TCATVRKEEKIAWCKLDRCQRMPFILQALLYHVAIGAIDPEDHCAVRELF
HKLR*
BS27301.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:35:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31010-PB | 254 | CG31010-PB | 1..254 | 1..254 | 1383 | 100 | Plus |
| CG31010-PA | 254 | CG31010-PA | 1..254 | 1..254 | 1383 | 100 | Plus |
