BS27313.complete Sequence
839 bp assembled on 2011-09-09
GenBank Submission: KX802673
> BS27313.complete
GAAGTTATCAGTCGACATGCTTCTGCGATCTCTACCAATTTTCCTTGCAC
TCTTTGTCCTTTCCAAAAGTGACACGGGTGCAGGTGAAGATTCGGAAGAG
GACGACGAAAACGACTGCAACCGGACGACTCTTGGTGGTCATCCCGTGAA
CATAACCACAGCGCCATGGATTGCTTCCATTTCGATCAAACAAAAGGCCA
AGTGCGACGGAGCGATATACAAACTGAGTCACATTGTGACAGCCGGGAAA
TGTGTGGATGGATTCCTGAACAAGGTGATCCGTGTACGAGTGGGTAGCAC
TACGCGCAGCGATGGAGTCATCGAAGTAGCAGTCTGCAACATTACAGTTC
ACGAAAAGTTCACCGGCCAGACAGTATTTCACAATGTGGCCATATTAAAG
TTGTGCGAACCGCTCGAGGCCTCCAAAACGATCCAGCCAATTCAGTTGGC
CAACCAGCTTCCGTCTAATGGGGCAAAGGTCACGGCCAACGGGTGGCCCT
CCTTCAGGTGGTGGGCAATGTATTGGAAGAAGTGTCTGGATGATGAAGCC
TACAAGCTGCAGAAGGCCGAGGTGAAGCTACTTGGCCCTAGCCAGTGCAC
AGATCTGTGGGCGCGAAACAATTGGTCCAAAAAGAATTTTACAGATGACT
TGTTCTGCACCGAGAAGTTCGCTAAGGAAGCCTGCTCTTTAGCGATGGGA
TCACCTGTGGTCCACAATGGCAAACTGGTCGGCATTATAACGAAAGGCGG
CTGTTCGGAGTATCCAGAAGTCTATATCAATCTTATAAAGTACAAGGACT
GGCTGCATAATCATACAAAGTAAAAGCTTTCTAGACCAT
BS27313.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:56:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32833-RA | 807 | CG32833-PA | 1..807 | 17..823 | 4035 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:56:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32833-RA | 1062 | CG32833-RA | 20..828 | 16..824 | 4045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:56:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22984507..22985315 | 824..16 | 4045 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:56:06 has no hits.
BS27313.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-09 10:39:22 Download gff for
BS27313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32833-RA | 1..805 | 17..821 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:59:27 Download gff for
BS27313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32833-RA | 21..825 | 17..821 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:58:28 Download gff for
BS27313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32833-RA | 21..825 | 17..821 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:58:28 Download gff for
BS27313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22984510..22985314 | 17..821 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:59:27 Download gff for
BS27313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18872033..18872837 | 17..821 | 100 | | Minus |
BS27313.pep Sequence
Translation from 16 to 822
> BS27313.pep
MLLRSLPIFLALFVLSKSDTGAGEDSEEDDENDCNRTTLGGHPVNITTAP
WIASISIKQKAKCDGAIYKLSHIVTAGKCVDGFLNKVIRVRVGSTTRSDG
VIEVAVCNITVHEKFTGQTVFHNVAILKLCEPLEASKTIQPIQLANQLPS
NGAKVTANGWPSFRWWAMYWKKCLDDEAYKLQKAEVKLLGPSQCTDLWAR
NNWSKKNFTDDLFCTEKFAKEACSLAMGSPVVHNGKLVGIITKGGCSEYP
EVYINLIKYKDWLHNHTK*
BS27313.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32833-PA | 268 | CG32833-PA | 1..268 | 1..268 | 1440 | 100 | Plus |
| CG9897-PA | 247 | CG9897-PA | 24..246 | 39..268 | 371 | 34.6 | Plus |
| CG32834-PB | 556 | CG32834-PB | 22..257 | 33..268 | 360 | 35.3 | Plus |
| Ser12-PA | 245 | CG17240-PA | 25..240 | 39..265 | 303 | 31.6 | Plus |
| CG30025-PA | 253 | CG30025-PA | 32..252 | 39..266 | 281 | 29.4 | Plus |
