BS27314.complete Sequence
677 bp assembled on 2011-09-07
GenBank Submission: KX802572
> BS27314.complete
GAAGTTATCAGTCGACATGATTGCAACGAACAGAATGGGATTCCTGGAGC
ATGACAGCTGGATTACAGTGGAGCTCCAGCACTCGCTGGCTGCAAACTCG
GAAAGTTTCTCCTTCCGCGGGAATGTGACGATTCCCAGTCTCAACTCTGG
TCTGGCCAATGTGGAGCAACCAGATCTGAGCACTGCCGATCTGGACTTGC
TGAAGAAACTGGCCCTTGGAAACGAGTTCTACCGTTTGAAGGCCACGGTG
GTGTATTCAAATGGAGCTAAGGCGCAGTTCATCACTTCCAACAAGGCCTG
TCGCCTGCTGCAAGCCCAATTGAATGACGTGCTTTGGGTGTCGCTCGAAC
CCTCCGGATACGTAACCGGCATCACTGTGTCCCAGGACACGGCCCCGGCC
ACTATAGAGTGCACCCAGGAAGACGTGAATAAGCTACTGGAAACGCAATT
CAGCACCGATGTCCTCATCCGCCACGCTGAACTGGCCCCCGTGCCCGATA
CTGCTGGCTTTATTCAGAAGGTGGAGCGGGAGCGCGAGGCCAGGGAGCGC
GGGGAGGTTCGGGATAACCGCGGCTTCTTTGCCAAATACTGGATGTACAT
CGTTCCGGTAGTTCTGTTGGTCTTCATTTCGGGAGCCACCAACCAGGACG
GTGCAAAATAGAAGCTTTCTAGACCAT
BS27314.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:49:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32441-RD | 645 | CG32441-PD | 1..645 | 17..661 | 3225 | 100 | Plus |
CG32441-RC | 684 | CG32441-PC | 60..684 | 37..661 | 3125 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:49:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32441-RD | 902 | CG32441-RD | 125..769 | 17..661 | 3225 | 100 | Plus |
CG32441-RC | 887 | CG32441-RC | 130..754 | 37..661 | 3125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:49:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21575225..21575610 | 204..589 | 1930 | 100 | Plus |
3L | 28110227 | 3L | 21574743..21574911 | 37..205 | 845 | 100 | Plus |
3L | 28110227 | 3L | 21575670..21575741 | 590..661 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:49:56 has no hits.
BS27314.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-07 10:56:24 Download gff for
BS27314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32441-RD | 125..762 | 17..654 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:56 Download gff for
BS27314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32441-RD | 125..762 | 17..654 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:32:39 Download gff for
BS27314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32441-RD | 125..762 | 17..654 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:32:39 Download gff for
BS27314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21574255..21574275 | 17..37 | 100 | -> | Plus |
3L | 21574744..21574911 | 38..205 | 100 | -> | Plus |
3L | 21575227..21575610 | 206..589 | 100 | -> | Plus |
3L | 21575670..21575734 | 590..654 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:56 Download gff for
BS27314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21567355..21567375 | 17..37 | 100 | -> | Plus |
arm_3L | 21567844..21568011 | 38..205 | 100 | -> | Plus |
arm_3L | 21568327..21568710 | 206..589 | 100 | -> | Plus |
arm_3L | 21568770..21568834 | 590..654 | 100 | | Plus |
BS27314.pep Sequence
Translation from 16 to 660
> BS27314.pep
MIATNRMGFLEHDSWITVELQHSLAANSESFSFRGNVTIPSLNSGLANVE
QPDLSTADLDLLKKLALGNEFYRLKATVVYSNGAKAQFITSNKACRLLQA
QLNDVLWVSLEPSGYVTGITVSQDTAPATIECTQEDVNKLLETQFSTDVL
IRHAELAPVPDTAGFIQKVEREREARERGEVRDNRGFFAKYWMYIVPVVL
LVFISGATNQDGAK*
BS27314.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32441-PD | 214 | CG32441-PD | 1..214 | 1..214 | 1088 | 100 | Plus |
CG32441-PC | 227 | CG32441-PC | 15..227 | 2..214 | 1056 | 97.2 | Plus |