Clone BS27314 Report

Search the DGRC for BS27314

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:273
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG32441-RD
Protein status:BS27314.pep: gold
Sequenced Size:677

Clone Sequence Records

BS27314.complete Sequence

677 bp assembled on 2011-09-07

GenBank Submission: KX802572

> BS27314.complete
GAAGTTATCAGTCGACATGATTGCAACGAACAGAATGGGATTCCTGGAGC
ATGACAGCTGGATTACAGTGGAGCTCCAGCACTCGCTGGCTGCAAACTCG
GAAAGTTTCTCCTTCCGCGGGAATGTGACGATTCCCAGTCTCAACTCTGG
TCTGGCCAATGTGGAGCAACCAGATCTGAGCACTGCCGATCTGGACTTGC
TGAAGAAACTGGCCCTTGGAAACGAGTTCTACCGTTTGAAGGCCACGGTG
GTGTATTCAAATGGAGCTAAGGCGCAGTTCATCACTTCCAACAAGGCCTG
TCGCCTGCTGCAAGCCCAATTGAATGACGTGCTTTGGGTGTCGCTCGAAC
CCTCCGGATACGTAACCGGCATCACTGTGTCCCAGGACACGGCCCCGGCC
ACTATAGAGTGCACCCAGGAAGACGTGAATAAGCTACTGGAAACGCAATT
CAGCACCGATGTCCTCATCCGCCACGCTGAACTGGCCCCCGTGCCCGATA
CTGCTGGCTTTATTCAGAAGGTGGAGCGGGAGCGCGAGGCCAGGGAGCGC
GGGGAGGTTCGGGATAACCGCGGCTTCTTTGCCAAATACTGGATGTACAT
CGTTCCGGTAGTTCTGTTGGTCTTCATTTCGGGAGCCACCAACCAGGACG
GTGCAAAATAGAAGCTTTCTAGACCAT

BS27314.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:49:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG32441-RD 645 CG32441-PD 1..645 17..661 3225 100 Plus
CG32441-RC 684 CG32441-PC 60..684 37..661 3125 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:49:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG32441-RD 902 CG32441-RD 125..769 17..661 3225 100 Plus
CG32441-RC 887 CG32441-RC 130..754 37..661 3125 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:49:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21575225..21575610 204..589 1930 100 Plus
3L 28110227 3L 21574743..21574911 37..205 845 100 Plus
3L 28110227 3L 21575670..21575741 590..661 360 100 Plus
Blast to na_te.dros performed on 2014-11-27 01:49:56 has no hits.

BS27314.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-07 10:56:24 Download gff for BS27314.complete
Subject Subject Range Query Range Percent Splice Strand
CG32441-RD 125..762 17..654 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:56 Download gff for BS27314.complete
Subject Subject Range Query Range Percent Splice Strand
CG32441-RD 125..762 17..654 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:32:39 Download gff for BS27314.complete
Subject Subject Range Query Range Percent Splice Strand
CG32441-RD 125..762 17..654 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:32:39 Download gff for BS27314.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21574255..21574275 17..37 100 -> Plus
3L 21574744..21574911 38..205 100 -> Plus
3L 21575227..21575610 206..589 100 -> Plus
3L 21575670..21575734 590..654 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:56 Download gff for BS27314.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21567355..21567375 17..37 100 -> Plus
arm_3L 21567844..21568011 38..205 100 -> Plus
arm_3L 21568327..21568710 206..589 100 -> Plus
arm_3L 21568770..21568834 590..654 100   Plus

BS27314.pep Sequence

Translation from 16 to 660

> BS27314.pep
MIATNRMGFLEHDSWITVELQHSLAANSESFSFRGNVTIPSLNSGLANVE
QPDLSTADLDLLKKLALGNEFYRLKATVVYSNGAKAQFITSNKACRLLQA
QLNDVLWVSLEPSGYVTGITVSQDTAPATIECTQEDVNKLLETQFSTDVL
IRHAELAPVPDTAGFIQKVEREREARERGEVRDNRGFFAKYWMYIVPVVL
LVFISGATNQDGAK*

BS27314.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG32441-PD 214 CG32441-PD 1..214 1..214 1088 100 Plus
CG32441-PC 227 CG32441-PC 15..227 2..214 1056 97.2 Plus