BS27315.complete Sequence
356 bp assembled on 2011-09-07
GenBank Submission: KX800373
> BS27315.complete
GAAGTTATCAGTCGACATGCTGCAAACAAATCGAGTCCTTCAAAAAGAGC
AGGCTGAACTATTTGCTATCCAGAAGAAACTCGACCGAGTGCTCCCCGTC
ATTCAGGAGGCATTAAATTCACTAAAGGTAGAGGAGCTGCATCTCAAGTC
TCAGGTGGTGGGCCAGCAGAACCCAAAAACGCAGTGCTCCCCTGGAAGGG
ATCCCCTCCACATAGATCTGTCGGTGGAGCAGTCCCCAATCACAACTGTG
ATGGAGTCCCATCTCGTCAACAGCCAGCAAATAGATCTGGATCTCGTAAG
CCAAATGAGGCGTTTCGAGGAGGAAGTCGACTCGGATTAAAAGCTTTCTA
GACCAT
BS27315.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:50:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32856-RB | 324 | CG32856-PB | 1..324 | 17..340 | 1620 | 100 | Plus |
| CG32856-RA | 324 | CG32856-PA | 1..324 | 17..340 | 1620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:50:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32856-RB | 620 | CG32856-RB | 168..493 | 17..342 | 1630 | 100 | Plus |
| CG32856-RA | 563 | CG32856-RA | 168..493 | 17..342 | 1630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:50:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15964805..15965021 | 342..126 | 1085 | 100 | Minus |
| 3R | 32079331 | 3R | 15965071..15965184 | 130..17 | 570 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:50:17 has no hits.
BS27315.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-07 10:56:25 Download gff for
BS27315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32856-RB | 168..489 | 17..338 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:03:04 Download gff for
BS27315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32856-RA | 168..489 | 17..338 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:32:45 Download gff for
BS27315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32856-RA | 168..489 | 17..338 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:32:45 Download gff for
BS27315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15964809..15965019 | 128..338 | 100 | <- | Minus |
| 3R | 15965074..15965184 | 17..127 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:03:04 Download gff for
BS27315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11790531..11790741 | 128..338 | 100 | <- | Minus |
| arm_3R | 11790796..11790906 | 17..127 | 100 | | Minus |
BS27315.pep Sequence
Translation from 16 to 339
> BS27315.pep
MLQTNRVLQKEQAELFAIQKKLDRVLPVIQEALNSLKVEELHLKSQVVGQ
QNPKTQCSPGRDPLHIDLSVEQSPITTVMESHLVNSQQIDLDLVSQMRRF
EEEVDSD*
BS27315.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32856-PB | 107 | CG32856-PB | 1..107 | 1..107 | 531 | 100 | Plus |
| CG32856-PA | 107 | CG32856-PA | 1..107 | 1..107 | 531 | 100 | Plus |
