BS27317.complete Sequence
380 bp assembled on 2011-09-07
GenBank Submission: KX804137
> BS27317.complete
GAAGTTATCAGTCGACATGACGGACATGTGGAGCTTGAAGATCTGTGCCT
GTCTGGGCCTTCTATTACTTTTCAAACCCATCGACTCCATGGGATGGCAA
GGACCTAAAGTTGACTGTACGGCCAACGGAACTCAGACGGAGTGTCCTGT
AGCATGTCCTGAAACCTGCGAGTACTCCGGCAATGGACCCTGCGTCAAGA
TGTGCGGAGCTCCTTGTGTGTGTAAGCCGGGATATGTTATCAATGAGAGG
ATTCCGGCCTGTGTTCTGCGATCCGATTGCCCAAAAGATGTTGTTCGAAA
GGAAGATATGCTACTGGGTGTATCGAACTTTAAGTGCTTTAGCAGAAATT
ACAACTGTTCTTAGAAGCTTTCTAGACCAT
BS27317.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:50:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acp62F-RA | 348 | CG1262-PA | 1..348 | 17..364 | 1725 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:50:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acp62F-RA | 479 | CG1262-RA | 24..373 | 17..366 | 1735 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:50:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2739773..2740122 | 17..366 | 1735 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:50:46 has no hits.
BS27317.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-07 10:56:26 Download gff for
BS27317.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp62F-RA | 24..371 | 17..364 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:03:16 Download gff for
BS27317.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp62F-RA | 24..371 | 17..364 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:32:53 Download gff for
BS27317.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp62F-RA | 24..371 | 17..364 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:32:53 Download gff for
BS27317.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2739773..2740120 | 17..364 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:03:16 Download gff for
BS27317.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2739773..2740120 | 17..364 | 99 | | Plus |
BS27317.pep Sequence
Translation from 16 to 363
> BS27317.pep
MTDMWSLKICACLGLLLLFKPIDSMGWQGPKVDCTANGTQTECPVACPET
CEYSGNGPCVKMCGAPCVCKPGYVINERIPACVLRSDCPKDVVRKEDMLL
GVSNFKCFSRNYNCS*
BS27317.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acp62F-PA | 115 | CG1262-PA | 1..115 | 1..115 | 657 | 100 | Plus |
CG33259-PA | 119 | CG33259-PA | 24..107 | 31..115 | 301 | 60 | Plus |
CG5267-PA | 178 | CG5267-PA | 106..171 | 31..97 | 181 | 50.7 | Plus |
CG34189-PA | 122 | CG34189-PA | 53..110 | 34..92 | 170 | 47.5 | Plus |