Clone BS27327 Report

Search the DGRC for BS27327

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:273
Well:27
Vector:pDNR-Dual
Associated Gene/TranscriptCG13239-RA
Protein status:BS27327.pep: gold
Sequenced Size:491

Clone Sequence Records

BS27327.complete Sequence

491 bp assembled on 2011-09-07

GenBank Submission: KX805128

> BS27327.complete
GAAGTTATCAGTCGACATGGCGCTCAGCTCGACTGTTGTCTGTCTTCTCG
CCGGTTTGCTTCTCCTCAGTCTCGCGCGGGCAGATGTGGGCGTGGCCACG
CAGCGTCTTCGCCCAGCGGATCAGCAGAAATCGGCCCTGTATCCAGCAGC
CGGCTTTAAGCCCTCTAGACAGTTTGGCCTTCCGGCAACCGACCAGCAAC
CGAAATCCGCTCGCCTTGTGGCCAACAGTGAAGCGCAGGAGGATCTCGAC
GACGCCGCCGAGGAGGTGGAGGTGACGCAACCAAAGACAGTTTCTGTGCC
ACGCCTAGTTCCTGCTCCAGGGCCAGCATTACCGGTAACTCCCACCATCG
CATACTATCCGGCCGAAGCCGTGGGATTCGTCCAGCCATCAACTTTCGCC
AAGTTCATCGGTGGCCCACAGCAGGCTGCACCATATGTAGCTGCGTCGCA
GTACTACCAAGCCTATTTTGGATAGAAGCTTTCTAGACCAT

BS27327.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:52:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG13239-RA 459 CG13239-PA 1..459 17..475 2295 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:52:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG13239-RA 704 CG13239-RA 1..460 17..476 2300 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:52:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22860787..22861246 17..476 2300 100 Plus
Blast to na_te.dros performed on 2014-11-27 01:52:05 has no hits.

BS27327.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-07 10:56:28 Download gff for BS27327.complete
Subject Subject Range Query Range Percent Splice Strand
CG13239-RA 1..459 17..475 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:03:46 Download gff for BS27327.complete
Subject Subject Range Query Range Percent Splice Strand
CG13239-RA 1..459 17..475 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:33:18 Download gff for BS27327.complete
Subject Subject Range Query Range Percent Splice Strand
CG13239-RA 1..459 17..475 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:33:18 Download gff for BS27327.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22860787..22861245 17..475 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:03:46 Download gff for BS27327.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22853887..22854345 17..475 100   Plus

BS27327.pep Sequence

Translation from 16 to 474

> BS27327.pep
MALSSTVVCLLAGLLLLSLARADVGVATQRLRPADQQKSALYPAAGFKPS
RQFGLPATDQQPKSARLVANSEAQEDLDDAAEEVEVTQPKTVSVPRLVPA
PGPALPVTPTIAYYPAEAVGFVQPSTFAKFIGGPQQAAPYVAASQYYQAY
FG*

BS27327.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13239-PA 152 CG13239-PA 1..152 1..152 765 100 Plus