Clone BS27328 Report

Search the DGRC for BS27328

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:273
Well:28
Vector:pDNR-Dual
Associated Gene/TranscriptCG15362-RA
Protein status:BS27328.pep: gold
Sequenced Size:539

Clone Sequence Records

BS27328.complete Sequence

539 bp assembled on 2011-09-07

GenBank Submission: KX804664

> BS27328.complete
GAAGTTATCAGTCGACATGTACATAGCCGGGCTGGCCGGTTTGGGCTTAA
TAGTTTTGGTATCGATCTACAAATGTGCCAGTGGCGAGGTTCGCCAGGCG
GAAAGCGAAAAGTGCTTCTTCTGCGACTTCGCCCACCGCCGCCAAGGACC
GCCGCCCATCCTGGAGGTGGAGACGGACGAGTACGTGATCTTCAAGGACA
AGTATCCGGCAGCCAGACTCCACTATCTGGCGATTCCCAAGGAGCACTTC
GACAGCCTGAAAGCGCTGAACAAATCGCACGTTGGATTGGTGCGGCGAAT
GGAGCAGGGCATGATGGAATTCCTGCGATCGCAGAACGTGGATCCCAAGG
AGGCGATTGTGGGCTTCCACTTGCCGCCGTTCATCTCGGTTCGCCACCTC
CACCTGCACGGCATTTTCCCGCCTGCCGACATGAGTTTCGGCAACAAGAT
CAGCTTTATGCCCTCATTCTGGTTCAAAAAGTCCAGTGATGCGATTCGGG
AATTGGAGGACCGGGAACTGTGAAAGCTTTCTAGACCAT

BS27328.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:52:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG15362-RA 507 CG15362-PA 1..507 17..523 2535 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:52:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG15362-RA 813 CG15362-RA 135..641 17..523 2535 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:52:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1981310..1981583 17..290 1370 100 Plus
2L 23513712 2L 1981641..1981832 290..481 960 100 Plus
2L 23513712 2L 1981884..1981927 480..523 220 100 Plus
Blast to na_te.dros performed on 2014-11-27 01:52:29 has no hits.

BS27328.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-07 10:56:29 Download gff for BS27328.complete
Subject Subject Range Query Range Percent Splice Strand
CG15362-RA 1..506 17..522 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:03:54 Download gff for BS27328.complete
Subject Subject Range Query Range Percent Splice Strand
CG15362-RA 135..640 17..522 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:33:24 Download gff for BS27328.complete
Subject Subject Range Query Range Percent Splice Strand
CG15362-RA 135..640 17..522 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:33:24 Download gff for BS27328.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1981310..1981583 17..290 100 -> Plus
2L 1981642..1981832 291..481 100 -> Plus
2L 1981886..1981926 482..522 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:03:54 Download gff for BS27328.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1981310..1981583 17..290 100 -> Plus
arm_2L 1981642..1981832 291..481 100 -> Plus
arm_2L 1981886..1981926 482..522 100   Plus

BS27328.pep Sequence

Translation from 16 to 522

> BS27328.pep
MYIAGLAGLGLIVLVSIYKCASGEVRQAESEKCFFCDFAHRRQGPPPILE
VETDEYVIFKDKYPAARLHYLAIPKEHFDSLKALNKSHVGLVRRMEQGMM
EFLRSQNVDPKEAIVGFHLPPFISVRHLHLHGIFPPADMSFGNKISFMPS
FWFKKSSDAIRELEDREL*

BS27328.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG15362-PA 168 CG15362-PA 1..168 1..168 887 100 Plus
CG34015-PA 139 CG34015-PA 4..139 31..167 330 47.4 Plus