BS27329.complete Sequence
452 bp assembled on 2011-09-07
GenBank Submission: KX805202
> BS27329.complete
GAAGTTATCAGTCGACATGGGTGGCAAAAGTTATTATTGCGACTACTGCT
GTTGCTTTCTGAAAAACGATCTGAATGTGAGGAAATTGCACAATGGTGGT
ATTGCACACGCAATTGCAAAGAGCAACTATTTGAAGCGTTACGAGGATCC
CAAAAAGATTTTGACTGAAGAGCGGCAGAAAACTCCTTGCAAGCGATACT
TTGGCAGTTACTGCAAGTTTGAAACATATTGCAAGTTTACCCACTATAGT
GGCGATAATCTACGGGAACTGGAGAAGTTGGTTCTCGCTAGAAAGAAGAG
AAAATCCCGAAAGAAAACCAACAAATGCAAGAGATGGCCCTGGAAAACTC
ATCTGCGAAAGGGATTACCCCCTTCCTTGCAACCCATTAACCCGGAAAAA
CTCAAGCAAACCGACTTTGAACTCAGTTGGGGCTAAAAGCTTTCTAGACC
AT
BS27329.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:52:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31922-RA | 420 | CG31922-PA | 1..420 | 17..436 | 2100 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:52:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31922-RA | 497 | CG31922-RA | 54..474 | 17..437 | 2105 | 100 | Plus |
Plap-RC | 2746 | CG5105-RC | 3..132 | 146..17 | 650 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:52:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1170610..1170766 | 281..437 | 785 | 100 | Plus |
2L | 23513712 | 2L | 1170418..1170553 | 146..281 | 680 | 100 | Plus |
2L | 23513712 | 2L | 1170234..1170363 | 17..146 | 650 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:52:55 has no hits.
BS27329.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-07 10:56:29 Download gff for
BS27329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31922-RA | 54..471 | 17..434 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:04:05 Download gff for
BS27329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31922-RA | 54..471 | 17..434 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:33:35 Download gff for
BS27329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31922-RA | 54..471 | 17..434 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:33:35 Download gff for
BS27329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1170234..1170363 | 17..146 | 100 | -> | Plus |
2L | 1170419..1170553 | 147..281 | 100 | -> | Plus |
2L | 1170611..1170763 | 282..434 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:05 Download gff for
BS27329.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1170234..1170363 | 17..146 | 100 | -> | Plus |
arm_2L | 1170419..1170553 | 147..281 | 100 | -> | Plus |
arm_2L | 1170611..1170763 | 282..434 | 100 | | Plus |
BS27329.pep Sequence
Translation from 16 to 435
> BS27329.pep
MGGKSYYCDYCCCFLKNDLNVRKLHNGGIAHAIAKSNYLKRYEDPKKILT
EERQKTPCKRYFGSYCKFETYCKFTHYSGDNLRELEKLVLARKKRKSRKK
TNKCKRWPWKTHLRKGLPPSLQPINPEKLKQTDFELSWG*
BS27329.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31922-PA | 139 | CG31922-PA | 1..139 | 1..139 | 783 | 100 | Plus |