BS27342.complete Sequence
791 bp assembled on 2011-09-08
GenBank Submission: KX803033
> BS27342.complete
GAAGTTATCAGTCGACATGGGTAGTATTAATAGTGAAGAGCAAAATGTCG
CTGTATCCGGATGGACAAAATCCAATTCACCGGAATTAATTGAAGAGGAG
CGACTTTACACCGAACTTGACTCGGAAGGTCGGATGATAAGCAGGACTAT
GACGCCATATGAGTGTCAGCTCGAAGGCGAAGTGGAGCAGTTGCAAGAGG
CGCTTTTCAAAATCTCGTCCCATTATGCCAAAGTTCAGTTCGGACTGCGA
CAAATATCCTTGGCTTCAGGTTCCGAGAGGGAAAATCTGTTAAAAGATTT
GGAGCGATTAATAGCAAAAGGACTAGATGCGACTGGTCCCATACGGGGCG
AAAAATTCTCCATGCCAGCCAAACTTCGCGTGAAGCAAGACAAGATTCTT
TGCCAACTGCGTGGAAGTCTCGGAGACTTGGTCGGTGCAACTGGAGTTGG
CTTTCACGCAAATCATTACCCGGCCACAAACAGATCTCTTAAGATTTATA
CAGGTGCTTCCAATAAGACTCCCCGCAGCAAAGGCGTCGGCCAGGATTGT
GGTATAAGCCGAAGATGCATTGGTCATGCAAAGGAAGAAAGCAAACCTGC
CACTGGATACATGAAACGCACCTGTGGTGATTTAAGTACGGAAAGCAAGA
TACACCTTTACCATACCAAGTCAGCCACTTATTCGAAGATTCGCGGTAAT
AGTAAAACAACGGAAGATGGAAAAACTCGTACAAACAATAATTATTTGGA
GCTGTTAAAGTCGAATTTAATTTAAAAGCTTTCTAGACCAT
BS27342.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:53:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32461-RA | 759 | CG32461-PA | 1..759 | 17..775 | 3780 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:53:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32461-RA | 882 | CG32461-RA | 17..778 | 16..777 | 3795 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:53:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22954525..22955286 | 777..16 | 3795 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:53:39 has no hits.
BS27342.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-08 17:54:18 Download gff for
BS27342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32461-RA | 18..774 | 17..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:58:07 Download gff for
BS27342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32461-RA | 18..774 | 17..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:57:26 Download gff for
BS27342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32461-RA | 18..774 | 17..773 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:57:26 Download gff for
BS27342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22954529..22955285 | 17..773 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:58:07 Download gff for
BS27342.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22947629..22948385 | 17..773 | 99 | | Minus |
BS27342.pep Sequence
Translation from 16 to 774
> BS27342.pep
MGSINSEEQNVAVSGWTKSNSPELIEEERLYTELDSEGRMISRTMTPYEC
QLEGEVEQLQEALFKISSHYAKVQFGLRQISLASGSERENLLKDLERLIA
KGLDATGPIRGEKFSMPAKLRVKQDKILCQLRGSLGDLVGATGVGFHANH
YPATNRSLKIYTGASNKTPRSKGVGQDCGISRRCIGHAKEESKPATGYMK
RTCGDLSTESKIHLYHTKSATYSKIRGNSKTTEDGKTRTNNNYLELLKSN
LI*
BS27342.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32461-PA | 252 | CG32461-PA | 1..252 | 1..252 | 1297 | 100 | Plus |