Clone BS27342 Report

Search the DGRC for BS27342

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:273
Well:42
Vector:pDNR-Dual
Associated Gene/TranscriptCG32461-RA
Protein status:BS27342.pep: gold
Sequenced Size:791

Clone Sequence Records

BS27342.complete Sequence

791 bp assembled on 2011-09-08

GenBank Submission: KX803033

> BS27342.complete
GAAGTTATCAGTCGACATGGGTAGTATTAATAGTGAAGAGCAAAATGTCG
CTGTATCCGGATGGACAAAATCCAATTCACCGGAATTAATTGAAGAGGAG
CGACTTTACACCGAACTTGACTCGGAAGGTCGGATGATAAGCAGGACTAT
GACGCCATATGAGTGTCAGCTCGAAGGCGAAGTGGAGCAGTTGCAAGAGG
CGCTTTTCAAAATCTCGTCCCATTATGCCAAAGTTCAGTTCGGACTGCGA
CAAATATCCTTGGCTTCAGGTTCCGAGAGGGAAAATCTGTTAAAAGATTT
GGAGCGATTAATAGCAAAAGGACTAGATGCGACTGGTCCCATACGGGGCG
AAAAATTCTCCATGCCAGCCAAACTTCGCGTGAAGCAAGACAAGATTCTT
TGCCAACTGCGTGGAAGTCTCGGAGACTTGGTCGGTGCAACTGGAGTTGG
CTTTCACGCAAATCATTACCCGGCCACAAACAGATCTCTTAAGATTTATA
CAGGTGCTTCCAATAAGACTCCCCGCAGCAAAGGCGTCGGCCAGGATTGT
GGTATAAGCCGAAGATGCATTGGTCATGCAAAGGAAGAAAGCAAACCTGC
CACTGGATACATGAAACGCACCTGTGGTGATTTAAGTACGGAAAGCAAGA
TACACCTTTACCATACCAAGTCAGCCACTTATTCGAAGATTCGCGGTAAT
AGTAAAACAACGGAAGATGGAAAAACTCGTACAAACAATAATTATTTGGA
GCTGTTAAAGTCGAATTTAATTTAAAAGCTTTCTAGACCAT

BS27342.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:53:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG32461-RA 759 CG32461-PA 1..759 17..775 3780 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:53:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG32461-RA 882 CG32461-RA 17..778 16..777 3795 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:53:39
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22954525..22955286 777..16 3795 99.9 Minus
Blast to na_te.dros performed on 2014-11-27 06:53:39 has no hits.

BS27342.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-08 17:54:18 Download gff for BS27342.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 18..774 17..773 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:58:07 Download gff for BS27342.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 18..774 17..773 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:57:26 Download gff for BS27342.complete
Subject Subject Range Query Range Percent Splice Strand
CG32461-RA 18..774 17..773 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:57:26 Download gff for BS27342.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22954529..22955285 17..773 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:58:07 Download gff for BS27342.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22947629..22948385 17..773 99   Minus

BS27342.pep Sequence

Translation from 16 to 774

> BS27342.pep
MGSINSEEQNVAVSGWTKSNSPELIEEERLYTELDSEGRMISRTMTPYEC
QLEGEVEQLQEALFKISSHYAKVQFGLRQISLASGSERENLLKDLERLIA
KGLDATGPIRGEKFSMPAKLRVKQDKILCQLRGSLGDLVGATGVGFHANH
YPATNRSLKIYTGASNKTPRSKGVGQDCGISRRCIGHAKEESKPATGYMK
RTCGDLSTESKIHLYHTKSATYSKIRGNSKTTEDGKTRTNNNYLELLKSN
LI*

BS27342.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG32461-PA 252 CG32461-PA 1..252 1..252 1297 100 Plus