BS27346.complete Sequence
974 bp assembled on 2011-09-09
GenBank Submission: KX806044
> BS27346.complete
GAAGTTATCAGTCGACATGACAAGTCGCTGGCTGCTATTAAGTTTGCTAC
TCTATTGGGGTAGCCAGGAGGTCTCCTCGGGTGTGATGGACAACTTTGGC
GATGGCTTGAAAATGGCCGGGCAAATGTTTGGCATCAATACGGCAGCAGA
TGTGGCAAATCTGGTAGCCAAGGCATTCTCCGGCAATTCTATGGCAAATG
TACCCAATTTGATTAGCTACGCCCAGAGTGGATTCCAAGGGCTGCGGCAA
AACAATGGTGCGGATGAACAGGAGGAGGATCAATCGGAGCAGCAATCGGA
AACGGAAAATGTCCAGGAAGAACCTCCGGTGGAGAACACAACCCGAAAAC
CTCCTCCGATAACCTTCGATTCCGGGCAAATGCTCTCCAATATGTTGAGA
ATGGTGGGTTTTGATACGCGGAAAATAGGAGCCCTAGCCTTAAATGCATT
GATTATGGTTGCTCAGGCGATTGGTAGCTCCCTGCTGCAGGTTACTCGGG
GAGGTGGAACATCTTTAATCGATGCTACGGAATCCCTGTATGAACCCAGC
GATCATCGACCACGTTCCCTATCCATGGGATCGCCCATCGATTGGTTTAT
GCAACGTACAGATCGCTATAGCAAACGACTAATCAAGGATATCATGGATC
GGGATTTGCCCGACTACATACTAGACATGATCGAAGCCAAGGAACAACCC
GAGGAGGGTAAAACCGCTGGTTGCCTAAAGCTTCTGATGTGCAAGGGTCA
ACCAATCATTTGGGGAATGCAGGAATCGTTAAAGAAACGCCTGGCTGGAG
AACCTGAAGAGCCCGATGATAACGATAGCTACTTTAACAAGAAAATCTTA
TTTAAACACTTGCCCAGTCTTGAGGATTTTAGGAACCATAGTGCTAGCTG
TGAAGTCAAATACCACGAGGAGTGCCCCAAGAATGCAACAACGGGAAGCT
ATTTTTAAAAGCTTTCTAGACCAT
BS27346.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:01:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32040-RA | 942 | CG32040-PA | 1..942 | 17..958 | 4710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:01:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32040-RA | 1364 | CG32040-RA | 304..1245 | 17..958 | 4710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:01:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9354849..9355338 | 469..958 | 2450 | 100 | Plus |
| 3L | 28110227 | 3L | 9354336..9354788 | 17..469 | 2265 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:01:04 has no hits.
BS27346.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-09 17:17:47 Download gff for
BS27346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32040-RA | 304..1243 | 17..956 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:30 Download gff for
BS27346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32040-RA | 304..1243 | 17..956 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:00:53 Download gff for
BS27346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32040-RA | 304..1243 | 17..956 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:00:53 Download gff for
BS27346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9354336..9354788 | 17..469 | 100 | -> | Plus |
| 3L | 9354850..9355336 | 470..956 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:30 Download gff for
BS27346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9347436..9347888 | 17..469 | 100 | -> | Plus |
| arm_3L | 9347950..9348436 | 470..956 | 100 | | Plus |
BS27346.pep Sequence
Translation from 16 to 957
> BS27346.pep
MTSRWLLLSLLLYWGSQEVSSGVMDNFGDGLKMAGQMFGINTAADVANLV
AKAFSGNSMANVPNLISYAQSGFQGLRQNNGADEQEEDQSEQQSETENVQ
EEPPVENTTRKPPPITFDSGQMLSNMLRMVGFDTRKIGALALNALIMVAQ
AIGSSLLQVTRGGGTSLIDATESLYEPSDHRPRSLSMGSPIDWFMQRTDR
YSKRLIKDIMDRDLPDYILDMIEAKEQPEEGKTAGCLKLLMCKGQPIIWG
MQESLKKRLAGEPEEPDDNDSYFNKKILFKHLPSLEDFRNHSASCEVKYH
EECPKNATTGSYF*
BS27346.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32040-PA | 313 | CG32040-PA | 1..313 | 1..313 | 1631 | 100 | Plus |
