Clone BS27352 Report

Search the DGRC for BS27352

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:273
Well:52
Vector:pDNR-Dual
Associated Gene/TranscriptCG43322-RA
Protein status:BS27352.pep: gold
Sequenced Size:1112

Clone Sequence Records

BS27352.complete Sequence

1112 bp assembled on 2011-09-07

GenBank Submission: KX802153

> BS27352.complete
GAAGTTATCAGTCGACATGTGGTTGGCTGGGAATCTGTTCAAAGGATCCG
TAGCAATCAGATTCGGTCGCTTGCTGCATCTCAAGCGCAAGGAGGTTTAT
ATGGAATGCTTCCGCATCCTGGGCGTTCACGAATCAGCTGATCAGAATAC
GGTACGCCACGCCTACTTGGATCTGGTGAAACGGGTGCATCCCGATTCGG
GAACGGAGGAGGCCAGTGCCGAACGCTTCCAGCAGGTGGACGAGGCTTTC
CGTGTGCTGCAGGAAAAGTTCGCCAAGGGAAGGCGAAACATTCAGGAGGA
CGAGGAGGGGGCCATGGAGTTTGACATCAAGCATACGGCGCCGCAGCACC
GGCAATATCTGTCCAACGAGGGCATCGGAGTGGGAACTCCATTTCAGCGG
CAAAAGCAGTACCAGCAGGTGCGCGCCATGAAGGCTCAGGAACGCGTCCT
GGAGCACCGCATCGACAAGGCGGCTGCCGGAGAGAAAACACTAATGTCCA
AGGGCGGCAGCCACTTTCGGAAACATGCTATTAAGACCAAGTACGGTATT
GATCGTGTGGTCGAGGATCTCATTCAGGAGGCCATGTCCAAGGGTGACTT
TAACAATCTAAACGGGTCTGGAAAGCCCCTGTCCTCGGCTCAGTCGCAGA
ATCCCTATCTGGACTTTACGACCCACAAGTTGAACAAGATTATGTTAGAC
AACGGCTTCACGCCGGAATGGATAAGCCTGGGCAAGGATATTCGCGATGC
GATTGCTCAGCTGAAGACGAAACTGCGCCAGGAGCGCAAATACTACGGCG
AATGGCCATTGCAGCGCCCGGACGATCTGGCAGCCTGGAAAATATTCACG
CTGAATCACCAGGACGATGTGAAGCAATTGAACAAACTCATTGACAAGTA
CAATCTAATAGTGCCCATTCTGGAAAATCAGTTCTTTCGCCTGCATCTCG
ACAGAATGGCCGAACCTATATTTAAGGATCCGGAATTGCAACGTAACGTA
ATCAGACCCGAAATGAAATCTAAGCCCAGCAGCAATCTAGAGAATCAGGG
CAGCGCTAGTACAAGTTTATTTTCCCTAATTAGCAAACTATTGTAAAAGC
TTTCTAGACCAT

BS27352.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:54:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG43322-RA 1080 CG43322-PA 1..1080 17..1096 5400 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:54:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG43322-RA 1272 CG43322-RA 101..1180 17..1096 5400 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:54:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7013652..7014645 103..1096 4970 100 Plus
2L 23513712 2L 7013496..7013583 17..104 440 100 Plus
Blast to na_te.dros performed on 2014-11-27 01:54:45 has no hits.

BS27352.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-07 10:56:32 Download gff for BS27352.complete
Subject Subject Range Query Range Percent Splice Strand
CG13776-RA 101..1178 17..1094 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:04:47 Download gff for BS27352.complete
Subject Subject Range Query Range Percent Splice Strand
CG43322-RA 101..1178 17..1094 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:34:09 Download gff for BS27352.complete
Subject Subject Range Query Range Percent Splice Strand
CG43322-RA 101..1178 17..1094 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:34:09 Download gff for BS27352.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7013496..7013582 17..103 100 -> Plus
2L 7013653..7014643 104..1094 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:47 Download gff for BS27352.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7013496..7013582 17..103 100 -> Plus
arm_2L 7013653..7014643 104..1094 100   Plus

BS27352.pep Sequence

Translation from 16 to 1095

> BS27352.pep
MWLAGNLFKGSVAIRFGRLLHLKRKEVYMECFRILGVHESADQNTVRHAY
LDLVKRVHPDSGTEEASAERFQQVDEAFRVLQEKFAKGRRNIQEDEEGAM
EFDIKHTAPQHRQYLSNEGIGVGTPFQRQKQYQQVRAMKAQERVLEHRID
KAAAGEKTLMSKGGSHFRKHAIKTKYGIDRVVEDLIQEAMSKGDFNNLNG
SGKPLSSAQSQNPYLDFTTHKLNKIMLDNGFTPEWISLGKDIRDAIAQLK
TKLRQERKYYGEWPLQRPDDLAAWKIFTLNHQDDVKQLNKLIDKYNLIVP
ILENQFFRLHLDRMAEPIFKDPELQRNVIRPEMKSKPSSNLENQGSASTS
LFSLISKLL*

BS27352.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG43322-PA 359 CG43322-PA 1..359 1..359 1862 100 Plus