BS27354.complete Sequence
1025 bp assembled on 2011-09-09
GenBank Submission: KX801814
> BS27354.complete
GAAGTTATCAGTCGACATGCTGCGACCACTGTGCATTATTCAGATCCTTT
TGCTCGCTTTCCTGGCGAACGAGTCGGAATCCTCGAACACTCATCTCCAT
CGCTATATGCTGGACACCTATAAGCCGCAGCACAATCGAAAAACCCAAAT
GAACTACAAACGACGCCGTACTGTAAGGAGCGATCACGAAATGGCTATCG
ATCCCAATAATCCAAATAATCCCAATAATCCAAATAATTCCGATAGTCCC
GATAATCCCAATAATCTCAATAATCCAAATAATCCGAATAATGACACAGT
ACAGTATGGACATTCCAAGGAGCCTGTAGTTACCTTGACCAATTCGGACA
AGAAGGTGCCGCTGCACGAGCTGATGGTGAGACTCTATCAGCAAAACAAA
TATATCTGCATGGGCACGGTGATATCCGAGATGCTAGTGATTACCACTAG
CACTTGTTTTAATTTGGCCAGCAGTGAAGTGGTCACGATGAAGATGTACG
ATGACGAAGTCCTCGAAGGGAAAAGAGTCGCTCTCAACCAGACCTACCTT
AAAGGAGCGGATCCCATGCTGGTTGCTATTCAACTAACCAAGTCCCCAAA
GAATTCCAAAGTGACTGGTGACACCGTGAAGCTGTGCGATTCGGAGCTAG
AAATATACGAGCCCATCGAGCTGCCACTGTGGATCAGGAGTCGCCACAGT
ATTCACTCGCAGACAACGTACATCATACCGATGCAGGCGTGCCGACTCCG
CATGAGGGATCCCGAAGCGATGGTCGCCACCGACACTATGATCTGCGTGA
AGAACATGAAGTATACGGCCCAGTGCCAGTTGGCCATGGGTAATCCCCTC
GTTCACGACGAACGCATCTGCGGCATCAATGTGGCTGGTCACAACTGTCC
CGCCTACACGGGCGTGGATCTATACATCAGGGTATACGATGCTCTCGCCT
TCTCGATAATGGGCATGGAAATCATTAAAAACTCCCGCATAGAAGATACC
ATTTTGTAAAAGCTTTCTAGACCAT
BS27354.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:04:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9997-RB | 993 | CG9997-PB | 1..993 | 17..1009 | 4965 | 100 | Plus |
CG9997-RA | 993 | CG9997-PA | 1..993 | 17..1009 | 4965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:04:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9997-RB | 1325 | CG9997-RB | 1..994 | 17..1010 | 4970 | 100 | Plus |
CG9997-RA | 1030 | CG9997-RA | 1..994 | 17..1010 | 4970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:04:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 28755986..28756979 | 1010..17 | 4970 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:04:37 has no hits.
BS27354.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-09 17:35:11 Download gff for
BS27354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9997-RA | 1..991 | 17..1007 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:04:20 Download gff for
BS27354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9997-RA | 1..991 | 17..1007 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:02:21 Download gff for
BS27354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9997-RA | 1..991 | 17..1007 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:02:21 Download gff for
BS27354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 28755989..28756979 | 17..1007 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:20 Download gff for
BS27354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 24581711..24582701 | 17..1007 | 100 | | Minus |
BS27354.pep Sequence
Translation from 16 to 1008
> BS27354.pep
MLRPLCIIQILLLAFLANESESSNTHLHRYMLDTYKPQHNRKTQMNYKRR
RTVRSDHEMAIDPNNPNNPNNPNNSDSPDNPNNLNNPNNPNNDTVQYGHS
KEPVVTLTNSDKKVPLHELMVRLYQQNKYICMGTVISEMLVITTSTCFNL
ASSEVVTMKMYDDEVLEGKRVALNQTYLKGADPMLVAIQLTKSPKNSKVT
GDTVKLCDSELEIYEPIELPLWIRSRHSIHSQTTYIIPMQACRLRMRDPE
AMVATDTMICVKNMKYTAQCQLAMGNPLVHDERICGINVAGHNCPAYTGV
DLYIRVYDALAFSIMGMEIIKNSRIEDTIL*
BS27354.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9997-PB | 330 | CG9997-PB | 1..330 | 1..330 | 1742 | 100 | Plus |
CG9997-PA | 330 | CG9997-PA | 1..330 | 1..330 | 1742 | 100 | Plus |
intr-PA | 298 | CG12558-PA | 102..285 | 120..309 | 169 | 25.1 | Plus |
Sems-PA | 275 | CG10586-PA | 59..270 | 120..320 | 150 | 24.2 | Plus |