BS27361.complete Sequence
560 bp assembled on 2011-09-16
GenBank Submission: KX802224
> BS27361.complete
GAAGTTATCAGTCGACATGGAACCTGCTAAAGTGATTGGAAAGCTAAAGG
AGCAAGTGCGCATGGAGCACAATTCGCGTCGTAGTTTTCCAAAAGCTTGG
AGCGAAATTTCGGGCAAGCAAACTAACAAGTTCTACCACCAATCTGAGAT
TAATTCTCAACTAAGTAACCAGCTAAAATTAAAAGACCTGTGCCCTTTTG
TGCACAACAACCAAGGCGAATCGCGATTCGTATCTCCGGAGATGTACAAA
CCTTTACTGGCCGTCTGTCGCTGTGGGCGAACTAAGGAAAGCATCCATAT
GGGAAAATGCTTACAAAGAGCCTTGAGTCCAGATTACAAGCAAGAAATGG
TACAGAATGGCACTGATGCATGGAGTGCAGAACCATTTAATGTGCCTTCC
ACTTCAAGCTCTACCATTGGCTTCGCAGCTATTTCGAAAAACTACCAAAA
GCTGGAGCGTTCTATGCAATATGTTTCTCCTGCGTTTTCCATGCCTGGCC
CTCGAATTACAGCAGTCCCTTACTATAATATTATTATTGGATAAAAGCTT
TCTAGACCAT
BS27361.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:36:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34453-RB | 528 | CG34453-PB | 1..528 | 17..544 | 2640 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:36:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34453-RB | 705 | CG34453-RB | 1..528 | 17..544 | 2640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:36:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 232848..233074 | 410..184 | 1135 | 100 | Minus |
| 3L | 28110227 | 3L | 233125..233264 | 185..46 | 700 | 100 | Minus |
| 3L | 28110227 | 3L | 232657..232790 | 544..411 | 670 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:36:13 has no hits.
BS27361.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-16 10:15:59 Download gff for
BS27361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34453-RB | 1..526 | 17..542 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:24:03 Download gff for
BS27361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34453-RB | 1..526 | 17..542 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:01:28 Download gff for
BS27361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34453-RB | 1..526 | 17..542 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:01:28 Download gff for
BS27361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 232659..232790 | 411..542 | 100 | <- | Minus |
| 3L | 232848..233072 | 186..410 | 100 | <- | Minus |
| 3L | 233125..233264 | 46..185 | 100 | <- | Minus |
| 3L | 233323..233351 | 17..45 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:24:03 Download gff for
BS27361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 232659..232790 | 411..542 | 100 | <- | Minus |
| arm_3L | 232848..233072 | 186..410 | 100 | <- | Minus |
| arm_3L | 233125..233264 | 46..185 | 100 | <- | Minus |
| arm_3L | 233323..233351 | 17..45 | 100 | | Minus |
BS27361.pep Sequence
Translation from 16 to 543
> BS27361.pep
MEPAKVIGKLKEQVRMEHNSRRSFPKAWSEISGKQTNKFYHQSEINSQLS
NQLKLKDLCPFVHNNQGESRFVSPEMYKPLLAVCRCGRTKESIHMGKCLQ
RALSPDYKQEMVQNGTDAWSAEPFNVPSTSSSTIGFAAISKNYQKLERSM
QYVSPAFSMPGPRITAVPYYNIIIG*
BS27361.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:21:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34453-PB | 175 | CG34453-PB | 1..175 | 1..175 | 923 | 100 | Plus |
