BS27362.complete Sequence
491 bp assembled on 2011-09-07
GenBank Submission: KX804085
> BS27362.complete
GAAGTTATCAGTCGACATGGAACAGGCGTACAGTACAGCTTCCCGACTGC
GTGGGATTTGCGTTTGTGGATTGGCCATTTCGGTGTATTCACTGTATGTG
AAAATGAAACTAAAGGAGGATGAGAACTATAGGCCAATGTGCGACGTTAA
CGATAATATAAGCTGCTCGCTGGTTTTTAAATCGGGCTATGGTGATGGCT
TTGGTCTGGGTAACATAACCCAAGTAAATGCTCCCAACGGAGCCATCGGC
TGTGCATTTTATATCCTGTACTTCTTGAGCTCTTTCTTTAATCATCGTTG
GCTGTGCCTGGTCCAATTGATAGTATGCACTTTGACATTACTTCTCTGCG
TTTATCTGGGTTTCCTGCTGATTCTCGTGTTTTACGATTTCTGTTTGGTA
TGCGTGACCATCTATTTCATACACACATGGCTCTTTCAGGAAGTCCTAAG
GCGATATAGACGCCTTTATATGTAAAAGCTTTCTAGACCAT
BS27362.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:55:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vkor-RA | 459 | CG33544-PA | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:55:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vkor-RA | 520 | CG33544-RA | 1..459 | 17..475 | 2295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:55:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16778740..16778933 | 282..475 | 970 | 100 | Plus |
| 2R | 25286936 | 2R | 16778365..16778534 | 17..186 | 850 | 100 | Plus |
| 2R | 25286936 | 2R | 16778589..16778684 | 186..281 | 480 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:55:30 has no hits.
BS27362.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-07 10:56:33 Download gff for
BS27362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vkor-RA | 1..457 | 17..473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:05:04 Download gff for
BS27362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vkor-RA | 1..457 | 17..473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:34:23 Download gff for
BS27362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vkor-RA | 1..457 | 17..473 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:34:23 Download gff for
BS27362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16778365..16778534 | 17..186 | 100 | -> | Plus |
| 2R | 16778590..16778684 | 187..281 | 100 | -> | Plus |
| 2R | 16778740..16778931 | 282..473 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:05:04 Download gff for
BS27362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12665870..12666039 | 17..186 | 100 | -> | Plus |
| arm_2R | 12666095..12666189 | 187..281 | 100 | -> | Plus |
| arm_2R | 12666245..12666436 | 282..473 | 100 | | Plus |
BS27362.pep Sequence
Translation from 16 to 474
> BS27362.pep
MEQAYSTASRLRGICVCGLAISVYSLYVKMKLKEDENYRPMCDVNDNISC
SLVFKSGYGDGFGLGNITQVNAPNGAIGCAFYILYFLSSFFNHRWLCLVQ
LIVCTLTLLLCVYLGFLLILVFYDFCLVCVTIYFIHTWLFQEVLRRYRRL
YM*
BS27362.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:07:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vkor-PA | 152 | CG33544-PA | 1..152 | 1..152 | 818 | 100 | Plus |
