BS27372.complete Sequence
851 bp assembled on 2011-09-16
GenBank Submission: KX805233
> BS27372.complete
GAAGTTATCAGTCGACATGTCCAAGCTGGGTGCTATCTTGTTGGTGGGCT
TGTGCCTGTTTGTGGCCGTGGCCTTGGCCGAGCCACGCCTTCAGCACGTT
CAGGGGCGCAATCAGGTGCAGGGTCAAAGGGCGCAGCAGCATCCCTACCT
CTTCCTGTCAATTCCCAAGGGTCGGGCCAACGCCGGCGCCGTCGTCCAGG
GCTTCGAAATTGTCGAGGAGGAAGATGATGATCTACATGATGAGGACCAG
CACGATGACGAGACGGAGGATGACGAGGAACTGGAGCATCAGCTGGGCCT
GAACTTTGCCCGCAGCGGTCTGGCTTACAGGCAGAACCACGCTGATGACG
AACAGGACGATGATCAGGATCAGGAGCAGGATCACGTTCAGGATGAGCTG
CCCAAGAAGCAGATGATGGTTAACCGGGATCAGGCTGGTGCCATTATGGT
GCCCGATGGCATTATCGAGATCGAGGGTCAGAGTGTTCTGGACGAGAAGA
CCGGCAAGGCGGCTCTCCTAGTGCCTCGTGCCGCCCTAGACGCCATTCCC
GATGGCGCGGTGGTGGCTCTTATGGAGCGATCCGCCTCATCCGTTGATGA
AATCGAGGAAGAGCGCGCCAACCGCGTGGTAGTTCGTCGCCGCAAGAACA
ACGGACGCAGGAACATTCGCCGCCGCGGCATCAACAACAACAATATCCGA
CGCCGCCGCCCCGCCCAAAGGCGTCGCCGAGTGGGTGGCAACCGCAGGCG
CAATGTACGCGTCATTCGCCCCCAAGGCGGCAACCGTAGGCGTGGCAACC
AGAGGCGCCGCGGACAGGTCGTATTCCAGGGTTGAAAGCTTTCTAGACCA
T
BS27372.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:41:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3598-RA | 819 | CG3598-PA | 1..819 | 17..835 | 4095 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:41:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3598-RA | 1047 | CG3598-RA | 102..920 | 17..835 | 4095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:41:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2937128..2937946 | 17..835 | 4095 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 07:41:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3279..3352 | 649..722 | 118 | 62.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2442 | 640..703 | 115 | 67.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2376..2431 | 640..695 | 109 | 66.1 | Plus |
BS27372.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-16 14:12:57 Download gff for
BS27372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3598-RA | 1..818 | 17..834 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:25:29 Download gff for
BS27372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3598-RA | 102..919 | 17..834 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:02:53 Download gff for
BS27372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3598-RA | 102..919 | 17..834 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:02:53 Download gff for
BS27372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2937128..2937945 | 17..834 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:25:29 Download gff for
BS27372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2831161..2831978 | 17..834 | 100 | | Plus |
BS27372.pep Sequence
Translation from 16 to 834
> BS27372.pep
MSKLGAILLVGLCLFVAVALAEPRLQHVQGRNQVQGQRAQQHPYLFLSIP
KGRANAGAVVQGFEIVEEEDDDLHDEDQHDDETEDDEELEHQLGLNFARS
GLAYRQNHADDEQDDDQDQEQDHVQDELPKKQMMVNRDQAGAIMVPDGII
EIEGQSVLDEKTGKAALLVPRAALDAIPDGAVVALMERSASSVDEIEEER
ANRVVVRRRKNNGRRNIRRRGINNNNIRRRRPAQRRRRVGGNRRRNVRVI
RPQGGNRRRGNQRRRGQVVFQG*
BS27372.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:23:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3598-PA | 272 | CG3598-PA | 1..272 | 1..272 | 1388 | 100 | Plus |
