BS27374.complete Sequence
897 bp assembled on 2011-09-16
GenBank Submission: KX800540
> BS27374.complete
GAAGTTATCAGTCGACATGCCATCCAATCAGTATCATCTGCTGCAGCTGC
ACCTGCTGCTCTGCGCCTTGCTCCTGACCTCTGGCCAAAGGACACCGGTT
CGCGTTCCGCCGCGAAATCTGCAGGTGCCCAACATTGGGGGCGAGAGCTT
CGAGAGATTCGACACCCGATCGGCATCGACGTCGAGCAGCGGAAGCAGCG
AGAGCCAGGAGACCAGCGATGAGATGCGGGAGCAACTGAAGCAACTTCTG
GGCGACCAGCTGGCCACCGCCTTTGCCCCCTTGGCCACCACGCCATTCAC
CAGGCGACAGCCGGCCATTGCATCACCCAGCTCGGGGGCGGCTGCCCGTT
CCCAGTTCGCCACCGATCCGGATCAGGGCCAGGAAGAAGAGTCCCCGGAC
CAGGACGGCGAGGCGGAAGAGGCAGAAGAGGAGGAAGAAGACGAAGAGGA
GCAGGAGGAGGCCACTCCGCAACCTCAGCCACTGCCACCAGCTCTACCGC
AACCAGGAGGCGTCTTGGAGGAGCTGGCTGGTGGTCAGGTGGACGAGGAG
CTGGAGGATTATAATGCCTGGCGCGACAATTTCTATGAACTCAACGAAGA
CGGAAGCTATATCTTTGGCTACTCCATTCCCCATGGCATTCGTCGCTGGG
AGAAGGGCTACTATTCGGAGGAGCAGCATGGCCGGGTGGTTGAGGGCTTC
TATGTCCAGCCCCGTCACGATTCCCAGGGCCTGAGATATGAGCTTCGATG
CTACAGAGCCGATTCCGAGGGCTATCAGCCGCGTCCAGTTGAGTTTCTGA
GGACGCCGCCAATTGTGAGGCGCGATGCCATACCGCGTGTTAATTGCTTC
CAAAATGCTTAAAAGCTTTCTAGACCATTCGTTTGGCGCTCTAAGGG
BS27374.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:43:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15754-RA | 846 | CG15754-PA | 1..846 | 17..862 | 4215 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:43:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15754-RA | 1001 | CG15754-RA | 8..855 | 17..864 | 4225 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:43:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13528013..13528614 | 17..618 | 2995 | 99.8 | Plus |
| X | 23542271 | X | 13528818..13528988 | 618..788 | 855 | 100 | Plus |
| X | 23542271 | X | 13529056..13529134 | 786..864 | 395 | 100 | Plus |
| X | 23542271 | X | 15652087..15652141 | 266..212 | 230 | 94.5 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:43:48 has no hits.
BS27374.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-16 14:24:31 Download gff for
BS27374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15754-RA | 1..848 | 17..864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:25:49 Download gff for
BS27374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15754-RA | 8..855 | 17..864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:03:35 Download gff for
BS27374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15754-RA | 8..855 | 17..864 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:03:35 Download gff for
BS27374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13529059..13529134 | 789..864 | 100 | | Plus |
| X | 13528013..13528614 | 17..618 | 99 | -> | Plus |
| X | 13528819..13528988 | 619..788 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:25:49 Download gff for
BS27374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13422046..13422647 | 17..618 | 99 | -> | Plus |
| arm_X | 13422852..13423021 | 619..788 | 100 | -> | Plus |
| arm_X | 13423092..13423167 | 789..864 | 100 | | Plus |
BS27374.pep Sequence
Translation from 16 to 861
> BS27374.pep
MPSNQYHLLQLHLLLCALLLTSGQRTPVRVPPRNLQVPNIGGESFERFDT
RSASTSSSGSSESQETSDEMREQLKQLLGDQLATAFAPLATTPFTRRQPA
IASPSSGAAARSQFATDPDQGQEEESPDQDGEAEEAEEEEEDEEEQEEAT
PQPQPLPPALPQPGGVLEELAGGQVDEELEDYNAWRDNFYELNEDGSYIF
GYSIPHGIRRWEKGYYSEEQHGRVVEGFYVQPRHDSQGLRYELRCYRADS
EGYQPRPVEFLRTPPIVRRDAIPRVNCFQNA*
BS27374.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:23:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15754-PA | 281 | CG15754-PA | 1..281 | 1..281 | 1484 | 100 | Plus |
