Clone BS27385 Report

Search the DGRC for BS27385

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:273
Well:85
Vector:pDNR-Dual
Associated Gene/TranscriptCG11454-RA
Protein status:BS27385.pep: gold
Sequenced Size:749

Clone Sequence Records

BS27385.complete Sequence

749 bp assembled on 2011-09-08

GenBank Submission: KX804186

> BS27385.complete
GAAGTTATCAGTCGACATGGACTTGCAGTTACTAATGCAGCAAATGTATA
GTGGTGCGTCGGTCATGACGATTTCGGAAACGAACATAGATGGTTACAGA
TACGGTATTCCATCTGGCCAGCACCAAGAGCAGCCAATTTACCCTTTCCT
GCCCAATGAAAACGGTGACCAGTTGGTTGGGCAACTGGAGGACGACGACG
ATGAGGAGGAGGACGAGGAGCAACGGACTCTGTTCTGCGGGAATCTCGAC
GAGCGCGTGACGGAGGAGATCCTTTACGAGGTGTTCCTGCAAGCTGGCCC
CATCGAAGGAGTGCGGATACCGACCGATAACAATGGGCGTCCCCGGAATT
TCGGGTTTGTCACATACCAACGCCTGTGTGCGGTGCCTTTTGCCCTAGAC
TTGTACCAGGGCCTTGAACTGTTCCAAAAGAAAGTCACCATCAAGCAGCA
GGGCGGCAAGCAGCTACCTGCCTACAACCAAAGTCGTCTGCGCAATCAGT
TCATGATGGAGGCTCTACCGCAGCCATCGCCACTGCGTCACGCCCGACAC
AGTTTGCATAACGGCAAGCCGTACGATCGCAATCCTTTTGGACACAACGC
CGATCAACGGCGCCGGAGCGACAGCTCCGTAATGGAACGCAACCGGCTAA
AACCACAGCAACACCACCAGCACATGCAGGGAGGCAGCAGAAGATCGGAC
CAACGCTCCAACAACAAACGCAGATTGCTTTAAAAGCTTTCTAGACCAT

BS27385.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:52:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG11454-RA 717 CG11454-PA 1..717 17..733 3585 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:52:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG11454-RA 905 CG11454-RA 56..772 17..733 3585 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:52:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 143378..144094 17..733 3585 100 Plus
Blast to na_te.dros performed on 2014-11-27 06:52:13 has no hits.

BS27385.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-08 17:31:31 Download gff for BS27385.complete
Subject Subject Range Query Range Percent Splice Strand
CG11454-RA 70..784 17..731 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:57:05 Download gff for BS27385.complete
Subject Subject Range Query Range Percent Splice Strand
CG11454-RA 56..770 17..731 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:56:40 Download gff for BS27385.complete
Subject Subject Range Query Range Percent Splice Strand
CG11454-RA 56..770 17..731 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:56:40 Download gff for BS27385.complete
Subject Subject Range Query Range Percent Splice Strand
2L 143378..144092 17..731 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:57:05 Download gff for BS27385.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 143378..144092 17..731 100   Plus

BS27385.pep Sequence

Translation from 16 to 732

> BS27385.pep
MDLQLLMQQMYSGASVMTISETNIDGYRYGIPSGQHQEQPIYPFLPNENG
DQLVGQLEDDDDEEEDEEQRTLFCGNLDERVTEEILYEVFLQAGPIEGVR
IPTDNNGRPRNFGFVTYQRLCAVPFALDLYQGLELFQKKVTIKQQGGKQL
PAYNQSRLRNQFMMEALPQPSPLRHARHSLHNGKPYDRNPFGHNADQRRR
SDSSVMERNRLKPQQHHQHMQGGSRRSDQRSNNKRRLL*

BS27385.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG11454-PA 238 CG11454-PA 1..238 1..238 1266 100 Plus