BS27393.complete Sequence
398 bp assembled on 2011-10-21
GenBank Submission: KX806277
> BS27393.complete
GAAGTTATCAGTCGACATGGCCAGCCTCAAGTGGTTAGCTATTCTACAAC
TCTTAATTATTTTCGGTGCTCTTGGGCACGCCGAAGTTGATGAAATTACC
GATGTCGTAAAGGAGAAGCTTTATGAGGCTATCTCCAAAACTGGATCTAC
GATCAAATCCGGATCGGCAAGCTTACAGAGTCTTGATGATGCCGTGCGTA
ACGTTATAAAAATGAAAAAGGGCGCGGCTAAGTCGCTCTTGGATCTAGTA
AGCAATCGTATCTTAAAACCTGAAAAGGACGCACCCGCTTCCCTCTCATC
ATGTGGTGAAGGGGAATTAGTTTGTGAAATCAAAGGGGTACTGGCCGCAG
AATCCACACAGCAACCAAACACCATAACTTAAAAGCTTTCTAGACCAT
BS27393.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:26:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp26Ad-RB | 366 | CG42603-PB | 1..366 | 17..382 | 1830 | 100 | Plus |
| Sfp26Ad-RA | 366 | CG42603-PA | 1..366 | 17..382 | 1830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:26:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp26Ad-RB | 612 | CG42603-RB | 51..416 | 17..382 | 1830 | 100 | Plus |
| Sfp26Ad-RA | 435 | CG42603-RA | 31..396 | 17..382 | 1830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:26:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5942819..5943133 | 382..68 | 1575 | 100 | Minus |
| 2L | 23513712 | 2L | 5943203..5943254 | 68..17 | 260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:26:48 has no hits.
BS27393.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-21 15:11:11 Download gff for
BS27393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp26Ad-RA | 10..373 | 17..380 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:58:22 Download gff for
BS27393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp26Ad-RA | 10..373 | 17..380 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:01:20 Download gff for
BS27393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp26Ad-RA | 31..394 | 17..380 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:01:20 Download gff for
BS27393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5942821..5943132 | 69..380 | 100 | <- | Minus |
| 2L | 5943203..5943254 | 17..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:58:22 Download gff for
BS27393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5942821..5943132 | 69..380 | 100 | <- | Minus |
| arm_2L | 5943203..5943254 | 17..68 | 100 | | Minus |
BS27393.pep Sequence
Translation from 16 to 381
> BS27393.pep
MASLKWLAILQLLIIFGALGHAEVDEITDVVKEKLYEAISKTGSTIKSGS
ASLQSLDDAVRNVIKMKKGAAKSLLDLVSNRILKPEKDAPASLSSCGEGE
LVCEIKGVLAAESTQQPNTIT*
BS27393.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:36:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp26Ad-PB | 121 | CG42603-PB | 1..121 | 1..121 | 588 | 100 | Plus |
| Sfp26Ad-PA | 121 | CG42603-PA | 1..121 | 1..121 | 588 | 100 | Plus |
