BS27402.complete Sequence
959 bp assembled on 2011-10-18
GenBank Submission: KX802339
> BS27402.complete
GAAGTTATCAGTCGACATGTTAAGGCGCAGTCTAAGCCATCTGGACAAGC
TGCCGAAGGCAAAGGTGGCCGAATGGCTGGCCGGGATCGACACCATTATT
TGCAGCACGGATGGGGTGCTGTGGCAGGAGAATACCCCCATTGAGGGCTC
TGTAGAGGCATTCAATGCCATAATTTCAAAGGGAAAGCGATGTCTCATAG
CCACCAACGAGTGCTGCCTAACAAACAAGGATCTGTTCCAGAAGGCCAAG
TGCCTGGGCTTCAATGTCAAGGAGCAGGACATTTTCAGCTCGTCGGGTGC
CATTGCGAGTTACCTTAGCGACCGGAAGTTTAAGAAGAAAATCCTCGTTT
TGGGTGGTGACGGTATCCGCAAAGATCTGAAAGAGGCCGGATTCTGTTCC
GTGGTAAACGATCTGCAGCCAAATGACCAGAAAAAAATCGACTTCGTCAG
GAGCTTAGTTCTCGATCCGGATGTGGGAGCTGTTTTGGTGGCCAGAGACG
ACAACATGATAGCGAACGAGTTGCTTGTGGCCTGCAACTATCTTCAAAAT
CCCAAAGTCTTGTTCCTTACCACTTGCATTGATGGATTCCAGCCATTTGG
GAAAAAGAGGATCCCAGATGCCGGATCTCTGGCCTCTGCCATCGAGATAA
TTGTACAACGCAAGCCTATCGTTTTGGGCAAACCGAATCAGCGGATTTTG
GGCAAGTTGATGAAGTCTGGCGAAATAAAGCCCGAAAAGACGCTTGTCAT
TGGAAACTCGCTTAAATCAGACATTTTATTTGCAAGTATATGTGGTTTCC
AATCATTATTGGTGGGCTGCGATAACGGAGCGATCGAAAAAGCCGAGAAA
ATTAAAAAAGAGGGAGATGAGAAGAAAATGAAACTTGTTCCAGATGCTTT
TCTCTCCGGTCTTGCTTCTTTTGGGGAGTATTTATGCATCTAGAAGCTTT
CTAGACCAT
BS27402.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:13:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11291-RA | 927 | CG11291-PA | 1..927 | 17..943 | 4635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:13:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11291-RA | 1280 | CG11291-RA | 71..997 | 17..943 | 4635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:13:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22211441..22212184 | 17..760 | 3720 | 100 | Plus |
| 2R | 25286936 | 2R | 22212238..22212421 | 760..943 | 920 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 22:13:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Paris | 1730 | Dvir\Paris TV1 1730bp Derived from Z49253. | 712..779 | 945..879 | 121 | 66.2 | Minus |
BS27402.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-18 10:25:17 Download gff for
BS27402.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11291-RA | 6..927 | 22..943 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:51:01 Download gff for
BS27402.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11291-RA | 76..997 | 22..943 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:54:48 Download gff for
BS27402.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11291-RA | 76..997 | 22..943 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:54:48 Download gff for
BS27402.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22212238..22212421 | 760..943 | 100 | | Plus |
| 2R | 22211446..22212183 | 22..759 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:51:01 Download gff for
BS27402.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18099743..18099926 | 760..943 | 100 | | Plus |
| arm_2R | 18098951..18099688 | 22..759 | 100 | -> | Plus |
BS27402.pep Sequence
Translation from 16 to 942
> BS27402.pep
MLRRSLSHLDKLPKAKVAEWLAGIDTIICSTDGVLWQENTPIEGSVEAFN
AIISKGKRCLIATNECCLTNKDLFQKAKCLGFNVKEQDIFSSSGAIASYL
SDRKFKKKILVLGGDGIRKDLKEAGFCSVVNDLQPNDQKKIDFVRSLVLD
PDVGAVLVARDDNMIANELLVACNYLQNPKVLFLTTCIDGFQPFGKKRIP
DAGSLASAIEIIVQRKPIVLGKPNQRILGKLMKSGEIKPEKTLVIGNSLK
SDILFASICGFQSLLVGCDNGAIEKAEKIKKEGDEKKMKLVPDAFLSGLA
SFGEYLCI*
BS27402.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:35:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11291-PA | 308 | CG11291-PA | 1..308 | 1..308 | 1575 | 100 | Plus |
| CG32488-PB | 307 | CG32488-PB | 1..307 | 1..307 | 604 | 39.3 | Plus |
| CG32488-PA | 307 | CG32488-PA | 1..307 | 1..307 | 604 | 39.3 | Plus |
| CG5567-PA | 330 | CG5567-PA | 16..315 | 1..299 | 521 | 37.3 | Plus |
| CG32487-PA | 320 | CG32487-PA | 19..315 | 12..306 | 461 | 35.9 | Plus |
