BS27403.complete Sequence
545 bp assembled on 2011-09-07
GenBank Submission: KX803732
> BS27403.complete
GAAGTTATCAGTCGACATGGTTGGACTCAAGTTTCCGTCGAACCGAACAC
TGGGCAATATTTGTGTCTACGGTGCGGTGGCCTCCATATCCGCTGTGATG
TACATGAAATGGAAGATGGAGGATCGGGTGAAATCCGCAGAGTACTACAA
ACTGGCCTTGAAGGCACTGCGGAGCCATCGAGGAGCAGTTGGTCTCCTGG
GTGAACCCATCAAGGACTCTGGCATCGATCTGTCCAACGCCAACAACAAT
TGCAATGCGGAGGAGGCGCGTTGTGAGGTGGCTGTGCGGGGCAGCAAGGA
TAAAGGAACTTTATACTTTTGGGCGTCCAATCAGCCGGATAGAGGCTGGC
TGATCGATCGACTGGAGCTGGAAACAAAACTCAACCCAGAGAAACGATTT
TTGCTTAAAAAATCCGAGGAACTAACCTTCGATCTGCCCGAGAGTATAAC
CAAACAAACTGCCCAGCAAGTTGATTCCAATGTCATTCTATCCGCATCGG
ATCAACAACCAGAAACACATTCAAAGTGAAAGCTTTCTAGACCAT
BS27403.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:45:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15653-RA | 513 | CG15653-PA | 1..513 | 17..529 | 2565 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:45:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15653-RA | 711 | CG15653-RA | 80..593 | 17..530 | 2570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:45:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21060179..21060468 | 306..17 | 1450 | 100 | Minus |
| 2R | 25286936 | 2R | 21059898..21060124 | 530..304 | 1135 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:45:42 has no hits.
BS27403.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-07 10:56:12 Download gff for
BS27403.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15653-RA | 42..553 | 17..528 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:01:18 Download gff for
BS27403.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15653-RA | 80..591 | 17..528 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:31:21 Download gff for
BS27403.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15653-RA | 80..591 | 17..528 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:31:21 Download gff for
BS27403.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21059900..21060122 | 306..528 | 100 | <- | Minus |
| 2R | 21060180..21060468 | 17..305 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:01:18 Download gff for
BS27403.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16947405..16947627 | 306..528 | 100 | <- | Minus |
| arm_2R | 16947685..16947973 | 17..305 | 100 | | Minus |
BS27403.pep Sequence
Translation from 16 to 528
> BS27403.pep
MVGLKFPSNRTLGNICVYGAVASISAVMYMKWKMEDRVKSAEYYKLALKA
LRSHRGAVGLLGEPIKDSGIDLSNANNNCNAEEARCEVAVRGSKDKGTLY
FWASNQPDRGWLIDRLELETKLNPEKRFLLKKSEELTFDLPESITKQTAQ
QVDSNVILSASDQQPETHSK*
BS27403.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15653-PA | 170 | CG15653-PA | 1..170 | 1..170 | 877 | 100 | Plus |
| CG31913-PA | 215 | CG31913-PA | 11..165 | 7..167 | 441 | 51.6 | Plus |
