Clone BS27431 Report

Search the DGRC for BS27431

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:274
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG5509-RA
Protein status:BS27431.pep: gold
Sequenced Size:452

Clone Sequence Records

BS27431.complete Sequence

452 bp assembled on 2011-09-07

GenBank Submission: KX804907

> BS27431.complete
GAAGTTATCAGTCGACATGTCCCGATACTCCATGAAAGGCATCAATTTCG
ATGTTAAACGCGATATACAAAAGGTGGATGCTCGCACCTACGGATTCCTG
AAGACCAAGGGATCAGATACGCCGATGCCCACGGCTGCGAAGAGAATTAA
TCAATCGACGTTGATCGAAAGATTGAAATCCATAACATTGGCTGAAGTGG
TGGACGAGGAAGATCAGTCGTCTACGGGTTCAGTGGAATCGGGTAGCATG
TCCTTCGAAATGAAACGGAAGCTATTTGACGCAGCCGAGTTCACCATCAC
CCGAGGTCAGAAACTGAGTGACCTCACGCATGCCGCTGATGAGGGGATTA
ACTTTAGTCCGTACGATACCGGCAACAAGACACTCGAAGAAATCGAGGAA
TACTGCCGCGCCGTCAACATTAAGTTTGCCAAATGAAAGCTTTCTAGACC
AT

BS27431.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:47:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG5509-RA 420 CG5509-PA 1..420 17..436 2100 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:47:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG5509-RA 733 CG5509-RA 73..495 17..439 2115 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:47:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12452536..12452958 17..439 2115 100 Plus
Blast to na_te.dros performed on 2014-11-27 01:47:53 has no hits.

BS27431.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-07 10:56:19 Download gff for BS27431.complete
Subject Subject Range Query Range Percent Splice Strand
CG5509-RA 73..491 17..435 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:12 Download gff for BS27431.complete
Subject Subject Range Query Range Percent Splice Strand
CG5509-RA 73..491 17..435 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:32:00 Download gff for BS27431.complete
Subject Subject Range Query Range Percent Splice Strand
CG5509-RA 73..491 17..435 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:32:00 Download gff for BS27431.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12452536..12452954 17..435 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:12 Download gff for BS27431.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8278258..8278676 17..435 100   Plus

BS27431.pep Sequence

Translation from 16 to 435

> BS27431.pep
MSRYSMKGINFDVKRDIQKVDARTYGFLKTKGSDTPMPTAAKRINQSTLI
ERLKSITLAEVVDEEDQSSTGSVESGSMSFEMKRKLFDAAEFTITRGQKL
SDLTHAADEGINFSPYDTGNKTLEEIEEYCRAVNIKFAK*

BS27431.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG5509-PA 139 CG5509-PA 1..139 1..139 700 100 Plus
I-t-PA 184 CG14719-PA 47..180 23..139 167 32.8 Plus