Clone BS27444 Report

Search the DGRC for BS27444

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:274
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG15155-RA
Protein status:BS27444.pep: gold
Sequenced Size:809

Clone Sequence Records

BS27444.complete Sequence

809 bp assembled on 2011-09-09

GenBank Submission: KX800827

> BS27444.complete
GAAGTTATCAGTCGACATGGATCGTCTGCAGCAGGTCGGCGTTCAGCAGT
TGGGTGATCTGAAGCGTGTTTTCACCCGGGAATGGCCAAAATACTGCAAG
GAGTACTACTGCCTGGACACGTTTCTGGAGCTATATAAAAAGGACGATCA
GCTGAAGGATGTGCAAGTCTATGCTCTTCCCAATCTAGAGCTCGGAATAT
TTGTGATCGTGGATCACTATCAGATATTTGTGGGCTTCCTGGAAGCTGAA
CAATCAGAAAGCCTTTTCAAGGAGTCCTTACTCAAGTTTAAGCTCTATGG
AGGCGAACAGTTCGCCTCAATGCCAAAAAGGTATTTCAATGTTGCCAACG
ACATTATTCAAGCGAAGAATCTGAAACTAGATCTCGACTGTGTAACACTT
TCCCTGGTCTTGAGCAAAGAGGAAGCCCTGCTTTTTCAAGTAGAACCTCC
AGCCGGATTTTCCCTTAAGCCGGTAGATATAGACGATGCTCAGGTGATTA
ATGATCAATGGGAATGGAGTGAGCCGGATTCCCTTTCCGTGGTCCGCCGT
CAAATTCTGGCTCCAGATGGCTTATTGGCAGTCCTTCAGGTCAAGACGAC
CTACAAACGCAGAGGCTTCGGCCAACTGATTGTGAAGGAATTTGCGAGAC
AAGAGGCTCTGCTGGGACGCGATACAATCACCGAAGTGGTTCCGGAAAAC
AAGGCATCCTTGGGCCTGTTCACCAAACTGGGCTTTAAAATCAACGACCA
GTGTCACTGGCTGATGACGGAGCCGCCAAAAGGAGTTCGATAAAAGCTTT
CTAGACCAT

BS27444.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:54:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG15155-RA 777 CG15155-PA 1..777 17..793 3885 100 Plus
CG15155-RB 774 CG15155-PB 1..774 17..793 3805 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:54:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG15155-RA 909 CG15155-RA 11..792 12..793 3895 99.9 Plus
CG15155-RB 906 CG15155-RB 11..789 12..793 3815 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:54:51
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18155591..18155825 559..793 1175 100 Plus
2L 23513712 2L 18155119..18155352 211..444 1170 100 Plus
2L 23513712 2L 18154861..18155061 12..212 990 99.5 Plus
2L 23513712 2L 18155415..18155529 445..559 575 100 Plus
Blast to na_te.dros performed on 2014-11-27 06:54:52 has no hits.

BS27444.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-09 09:01:19 Download gff for BS27444.complete
Subject Subject Range Query Range Percent Splice Strand
CG15155-RA 3..777 17..791 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:58:45 Download gff for BS27444.complete
Subject Subject Range Query Range Percent Splice Strand
CG15155-RA 16..790 17..791 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:57:53 Download gff for BS27444.complete
Subject Subject Range Query Range Percent Splice Strand
CG15155-RA 16..790 17..791 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:57:53 Download gff for BS27444.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18154866..18155060 17..211 100 -> Plus
2L 18155120..18155352 212..444 100 -> Plus
2L 18155415..18155528 445..558 100 -> Plus
2L 18155591..18155823 559..791 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:58:45 Download gff for BS27444.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18154866..18155060 17..211 100 -> Plus
arm_2L 18155120..18155352 212..444 100 -> Plus
arm_2L 18155415..18155528 445..558 100 -> Plus
arm_2L 18155591..18155823 559..791 100   Plus

BS27444.pep Sequence

Translation from 16 to 792

> BS27444.pep
MDRLQQVGVQQLGDLKRVFTREWPKYCKEYYCLDTFLELYKKDDQLKDVQ
VYALPNLELGIFVIVDHYQIFVGFLEAEQSESLFKESLLKFKLYGGEQFA
SMPKRYFNVANDIIQAKNLKLDLDCVTLSLVLSKEEALLFQVEPPAGFSL
KPVDIDDAQVINDQWEWSEPDSLSVVRRQILAPDGLLAVLQVKTTYKRRG
FGQLIVKEFARQEALLGRDTITEVVPENKASLGLFTKLGFKINDQCHWLM
TEPPKGVR*

BS27444.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG15155-PA 258 CG15155-PA 1..258 1..258 1337 100 Plus
CG15155-PB 257 CG15155-PB 1..257 1..258 1321 99.6 Plus
CG5783-PA 287 CG5783-PA 4..279 3..256 467 36.2 Plus
CG17681-PA 293 CG17681-PA 13..284 9..256 253 25.2 Plus
CG12560-PB 278 CG12560-PB 135..276 127..248 192 32.4 Plus