BS27444.complete Sequence
809 bp assembled on 2011-09-09
GenBank Submission: KX800827
> BS27444.complete
GAAGTTATCAGTCGACATGGATCGTCTGCAGCAGGTCGGCGTTCAGCAGT
TGGGTGATCTGAAGCGTGTTTTCACCCGGGAATGGCCAAAATACTGCAAG
GAGTACTACTGCCTGGACACGTTTCTGGAGCTATATAAAAAGGACGATCA
GCTGAAGGATGTGCAAGTCTATGCTCTTCCCAATCTAGAGCTCGGAATAT
TTGTGATCGTGGATCACTATCAGATATTTGTGGGCTTCCTGGAAGCTGAA
CAATCAGAAAGCCTTTTCAAGGAGTCCTTACTCAAGTTTAAGCTCTATGG
AGGCGAACAGTTCGCCTCAATGCCAAAAAGGTATTTCAATGTTGCCAACG
ACATTATTCAAGCGAAGAATCTGAAACTAGATCTCGACTGTGTAACACTT
TCCCTGGTCTTGAGCAAAGAGGAAGCCCTGCTTTTTCAAGTAGAACCTCC
AGCCGGATTTTCCCTTAAGCCGGTAGATATAGACGATGCTCAGGTGATTA
ATGATCAATGGGAATGGAGTGAGCCGGATTCCCTTTCCGTGGTCCGCCGT
CAAATTCTGGCTCCAGATGGCTTATTGGCAGTCCTTCAGGTCAAGACGAC
CTACAAACGCAGAGGCTTCGGCCAACTGATTGTGAAGGAATTTGCGAGAC
AAGAGGCTCTGCTGGGACGCGATACAATCACCGAAGTGGTTCCGGAAAAC
AAGGCATCCTTGGGCCTGTTCACCAAACTGGGCTTTAAAATCAACGACCA
GTGTCACTGGCTGATGACGGAGCCGCCAAAAGGAGTTCGATAAAAGCTTT
CTAGACCAT
BS27444.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:54:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15155-RA | 777 | CG15155-PA | 1..777 | 17..793 | 3885 | 100 | Plus |
CG15155-RB | 774 | CG15155-PB | 1..774 | 17..793 | 3805 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:54:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15155-RA | 909 | CG15155-RA | 11..792 | 12..793 | 3895 | 99.9 | Plus |
CG15155-RB | 906 | CG15155-RB | 11..789 | 12..793 | 3815 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:54:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18155591..18155825 | 559..793 | 1175 | 100 | Plus |
2L | 23513712 | 2L | 18155119..18155352 | 211..444 | 1170 | 100 | Plus |
2L | 23513712 | 2L | 18154861..18155061 | 12..212 | 990 | 99.5 | Plus |
2L | 23513712 | 2L | 18155415..18155529 | 445..559 | 575 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:54:52 has no hits.
BS27444.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-09 09:01:19 Download gff for
BS27444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15155-RA | 3..777 | 17..791 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:58:45 Download gff for
BS27444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15155-RA | 16..790 | 17..791 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:57:53 Download gff for
BS27444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15155-RA | 16..790 | 17..791 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:57:53 Download gff for
BS27444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18154866..18155060 | 17..211 | 100 | -> | Plus |
2L | 18155120..18155352 | 212..444 | 100 | -> | Plus |
2L | 18155415..18155528 | 445..558 | 100 | -> | Plus |
2L | 18155591..18155823 | 559..791 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:58:45 Download gff for
BS27444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18154866..18155060 | 17..211 | 100 | -> | Plus |
arm_2L | 18155120..18155352 | 212..444 | 100 | -> | Plus |
arm_2L | 18155415..18155528 | 445..558 | 100 | -> | Plus |
arm_2L | 18155591..18155823 | 559..791 | 100 | | Plus |
BS27444.pep Sequence
Translation from 16 to 792
> BS27444.pep
MDRLQQVGVQQLGDLKRVFTREWPKYCKEYYCLDTFLELYKKDDQLKDVQ
VYALPNLELGIFVIVDHYQIFVGFLEAEQSESLFKESLLKFKLYGGEQFA
SMPKRYFNVANDIIQAKNLKLDLDCVTLSLVLSKEEALLFQVEPPAGFSL
KPVDIDDAQVINDQWEWSEPDSLSVVRRQILAPDGLLAVLQVKTTYKRRG
FGQLIVKEFARQEALLGRDTITEVVPENKASLGLFTKLGFKINDQCHWLM
TEPPKGVR*
BS27444.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15155-PA | 258 | CG15155-PA | 1..258 | 1..258 | 1337 | 100 | Plus |
CG15155-PB | 257 | CG15155-PB | 1..257 | 1..258 | 1321 | 99.6 | Plus |
CG5783-PA | 287 | CG5783-PA | 4..279 | 3..256 | 467 | 36.2 | Plus |
CG17681-PA | 293 | CG17681-PA | 13..284 | 9..256 | 253 | 25.2 | Plus |
CG12560-PB | 278 | CG12560-PB | 135..276 | 127..248 | 192 | 32.4 | Plus |