BS27450.complete Sequence
593 bp assembled on 2011-09-07
GenBank Submission: KX801682
> BS27450.complete
GAAGTTATCAGTCGACATGCTGAAGACATTGGTTCAACTTTTCCTTGTTG
TCGCCGGTTTTGCACCAGGATTCGGCTACGACAAGTACACCACACACATA
CAAAATGGAAACCCGTACAACTTGACCGTTGACATGACTCCCTTCATTAA
GATCAACGAAAGCTACTATGTTTTTGGACAGACTAAGGTCAATTGGTATG
TCGCCTACGAGAACTGCCGCAGGCTTCAATCCGAACTGGTGACCTTCGAA
ACAGCCGAAGAGTTTGACGCCATTGCCGCGTTCTTGAATGCCCGAGGAGA
TCGCTCCGAGCACTGGACCTCCGGCAATGATTTGGGCAAAACCGGCACCC
ACTACTGGTTCTCTAATGCACAACTCGTGACCATTAAGCGTTGGGCGCCC
AAACAACCAGACAATGCTGGCGGTAGGGAGCATTGCATACACTTGGGCTA
CATCTACGGCTATTCAACGGAGTTCCAACTGAATGATCGACCCTGCCACA
ACCACGCGAGTAGCTTGTTTAAGTACATTTGTGAGGCTCCAAAGCAGGAA
ACTGTATCTATTGTTGTTTGGAAGTAGAAGCTTTCTAGACCAT
BS27450.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:49:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-37Da-RB | 561 | CG33532-PB | 1..561 | 17..577 | 2805 | 100 | Plus |
| lectin-37Da-RA | 561 | CG33532-PA | 1..561 | 17..577 | 2805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:49:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-37Da-RB | 638 | CG33532-RB | 2..563 | 17..578 | 2810 | 100 | Plus |
| lectin-37Da-RA | 651 | CG33532-RA | 2..563 | 17..578 | 2810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:49:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19418470..19418941 | 107..578 | 2360 | 100 | Plus |
| 2L | 23513712 | 2L | 19418318..19418409 | 17..108 | 460 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:49:06 has no hits.
BS27450.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-07 10:56:22 Download gff for
BS27450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-37Da-RB | 2..562 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:38 Download gff for
BS27450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-37Da-RA | 2..562 | 17..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:32:21 Download gff for
BS27450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-37Da-RA | 2..562 | 17..577 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:32:21 Download gff for
BS27450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19418318..19418408 | 17..107 | 100 | -> | Plus |
| 2L | 19418471..19418940 | 108..577 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:38 Download gff for
BS27450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19418318..19418408 | 17..107 | 100 | -> | Plus |
| arm_2L | 19418471..19418940 | 108..577 | 100 | | Plus |
BS27450.pep Sequence
Translation from 16 to 576
> BS27450.pep
MLKTLVQLFLVVAGFAPGFGYDKYTTHIQNGNPYNLTVDMTPFIKINESY
YVFGQTKVNWYVAYENCRRLQSELVTFETAEEFDAIAAFLNARGDRSEHW
TSGNDLGKTGTHYWFSNAQLVTIKRWAPKQPDNAGGREHCIHLGYIYGYS
TEFQLNDRPCHNHASSLFKYICEAPKQETVSIVVWK*
BS27450.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-37Da-PB | 186 | CG33532-PB | 1..186 | 1..186 | 1022 | 100 | Plus |
| lectin-37Da-PA | 186 | CG33532-PA | 1..186 | 1..186 | 1022 | 100 | Plus |
| Lectin-galC1-PB | 186 | CG9976-PB | 1..186 | 1..186 | 592 | 57.5 | Plus |
| Lectin-galC1-PA | 186 | CG9976-PA | 1..186 | 1..186 | 592 | 57.5 | Plus |
| CG12111-PB | 188 | CG12111-PB | 28..180 | 21..179 | 272 | 36 | Plus |
