BS27456.complete Sequence
803 bp assembled on 2011-09-16
GenBank Submission: KX804731
> BS27456.complete
GAAGTTATCAGTCGACATGAATGATCAGCCAGTCGATGGCGTCGTGCGCC
TTCGTCTCAAGGTGGCCCAGTGGATCTACGGCATTGCGGCGCTGTTCATT
GTCCTGGCCATTGGGCTGCTCATCTTGCCGGGCCTGTTCAGACGATACCT
CCTGGTTCCGGATGTAGTGGCTACCTATTGCTTCTTTGTCATCGGATTGG
TCACCCTGTGCGTCTATGTCAACGTCACTTGGCTGCGCCGGAAGTTCCCC
TTCAACTGGATAGTCAGCTGCTGCATAGCAGCCTGTCTGGCACTGGGAAC
GGTGTGTATCCTTTCAAACCAGCGGACGGGACACGTCCTGCTGCTGAGCA
TGGAGATTCTTGTCATGATGGCGCTGCTCCTGCTGGTCGGCTCATATCTA
TTGCCCGAATGCCCTGCAATGGCCTACTTGTTCCTCACTTGGTTCATATT
CGTTGTGCTCTCCTCCGTCCTAATGGCCGCCGTTTGTGTACACGTTTCAG
ATCAGATATTCTCCTATGAAGTAGCCACCCACTTTGTGCTCTGGCAAGTT
ATATGCCCATTGATTGTGTTCCAGGCGCAGGTCATATCCGGCTATTGGGA
GAATTTACCGCCAATTCTGGATAGGCCGCTGTGCTCCACGATGCTCCTGT
TCGACTTTCTCGCCTGCTACATCTTTCTTGACTCCGCCAATGACGTTGGT
TTTGAGTTCTACTACGCTGGCCAGACGGCAAATCAAAAGTTTTTGTCCAG
ATCCGTTAAGAGCCAGTGGGAGATGTTCATGGATTAGAAGCTTTCTAGAC
CAT
BS27456.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:48:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43779-RA | 771 | CG43779-PA | 1..771 | 17..787 | 3855 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:48:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43779-RA | 836 | CG43779-RA | 1..771 | 17..787 | 3855 | 100 | Plus |
CG16825-RB | 3020 | CG16825-RB | 1198..1968 | 787..17 | 3855 | 100 | Minus |
CG16825-RA | 1888 | CG16825-RA | 66..836 | 787..17 | 3855 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:48:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13305985..13306755 | 787..17 | 3855 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:48:24 has no hits.
BS27456.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-16 10:15:49 Download gff for
BS27456.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15639-RB | 1..771 | 17..787 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:23:11 Download gff for
BS27456.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16825-RA | 66..836 | 17..787 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:17:17 Download gff for
BS27456.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16825-RA | 66..836 | 17..787 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:17:17 Download gff for
BS27456.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13305985..13306755 | 17..787 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:23:11 Download gff for
BS27456.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13305985..13306755 | 17..787 | 100 | | Minus |
BS27456.pep Sequence
Translation from 16 to 786
> BS27456.pep
MNDQPVDGVVRLRLKVAQWIYGIAALFIVLAIGLLILPGLFRRYLLVPDV
VATYCFFVIGLVTLCVYVNVTWLRRKFPFNWIVSCCIAACLALGTVCILS
NQRTGHVLLLSMEILVMMALLLLVGSYLLPECPAMAYLFLTWFIFVVLSS
VLMAAVCVHVSDQIFSYEVATHFVLWQVICPLIVFQAQVISGYWENLPPI
LDRPLCSTMLLFDFLACYIFLDSANDVGFEFYYAGQTANQKFLSRSVKSQ
WEMFMD*
BS27456.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43779-PA | 256 | CG43779-PA | 1..256 | 1..256 | 1342 | 100 | Plus |