BS27463.complete Sequence
771 bp assembled on 2011-09-16
GenBank Submission: KX806548
> BS27463.complete
GAAGTTATCAGTCGACATGCGGTTCATCGGTTGTGCTTTCTTGGGCTTCA
TGTGCCTGGTGGCTTTTCCCTCTGCAACGCCGGCTATTTTGGCTCCGATC
CGGCCATATGGTCAGAATGGAACCCTCGCTCAGCAGAACAACTTTGCCTT
GGAGCTGAAGTCGGTGATTCGACAGATACCGGTGGACAACATCGAGAAGC
TGGTTCAGACCTACCTCCTCAACGACATCGAGTTCCAAGGTGTGATCAGA
GCCATTAACTCCCTACCCGCCTATCGATTCTACCGCCAGTTGATCAACCA
ACCCGAAGTGCGCCAACTGCAGCAGTGGATCACGCAGCAATTGATCCTGT
CCGGCGGTGGACCCAAAATCTTTGATTATCTAGAACTGGAGATCAAGATC
TTGAACAAGTATCCCTATTGGTCGCAGATCGTAAATGGAATCCAGGGATT
CCAAGCGGAGTTCGTGCAGATCTACCCAGTGCAACTGATCCGATCCTTTC
TGGAACCCAGTGCCACCCAAACAAGTCCTCAACTGTCGGAACTCTGGCGT
CGTCTGGTGGCCTTGCGTCCAGTTTACGAAAGAGTTTTGGCCACTCCACC
CGGCAAGGCCATCACTGCTGAACTCCAGAGACTGGGCGTGGATGTGGGTG
GTGTAGACGCCCTTATCCGTTATCAGTTCGGTTGGAGCAACGTCACCTTT
CCGAGCTACGATTACACAGATTACCTGTACTAGAAGCTTTCTAGACCATT
CGTTTGGCGCGCAGAAGAGGG
BS27463.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:48:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13905-RB | 717 | CG13905-PB | 1..717 | 17..733 | 3585 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:48:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13905-RB | 913 | CG13905-RB | 1..718 | 17..734 | 3590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:48:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 902898..903615 | 17..734 | 3590 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:48:35 has no hits.
BS27463.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-16 10:15:51 Download gff for
BS27463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13905-RB | 1..722 | 17..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:23:14 Download gff for
BS27463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13905-RB | 1..722 | 17..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:17:19 Download gff for
BS27463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13905-RB | 1..722 | 17..739 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:17:19 Download gff for
BS27463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 902898..903619 | 17..739 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:23:14 Download gff for
BS27463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 902898..903619 | 17..739 | 99 | | Plus |
BS27463.pep Sequence
Translation from 16 to 732
> BS27463.pep
MRFIGCAFLGFMCLVAFPSATPAILAPIRPYGQNGTLAQQNNFALELKSV
IRQIPVDNIEKLVQTYLLNDIEFQGVIRAINSLPAYRFYRQLINQPEVRQ
LQQWITQQLILSGGGPKIFDYLELEIKILNKYPYWSQIVNGIQGFQAEFV
QIYPVQLIRSFLEPSATQTSPQLSELWRRLVALRPVYERVLATPPGKAIT
AELQRLGVDVGGVDALIRYQFGWSNVTFPSYDYTDYLY*
BS27463.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13905-PB | 238 | CG13905-PB | 1..238 | 1..238 | 1235 | 100 | Plus |
CG14963-PA | 261 | CG14963-PA | 29..228 | 21..226 | 310 | 35.9 | Plus |