Clone BS27463 Report

Search the DGRC for BS27463

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:274
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG13905-RB
Protein status:BS27463.pep: gold
Sequenced Size:771

Clone Sequence Records

BS27463.complete Sequence

771 bp assembled on 2011-09-16

GenBank Submission: KX806548

> BS27463.complete
GAAGTTATCAGTCGACATGCGGTTCATCGGTTGTGCTTTCTTGGGCTTCA
TGTGCCTGGTGGCTTTTCCCTCTGCAACGCCGGCTATTTTGGCTCCGATC
CGGCCATATGGTCAGAATGGAACCCTCGCTCAGCAGAACAACTTTGCCTT
GGAGCTGAAGTCGGTGATTCGACAGATACCGGTGGACAACATCGAGAAGC
TGGTTCAGACCTACCTCCTCAACGACATCGAGTTCCAAGGTGTGATCAGA
GCCATTAACTCCCTACCCGCCTATCGATTCTACCGCCAGTTGATCAACCA
ACCCGAAGTGCGCCAACTGCAGCAGTGGATCACGCAGCAATTGATCCTGT
CCGGCGGTGGACCCAAAATCTTTGATTATCTAGAACTGGAGATCAAGATC
TTGAACAAGTATCCCTATTGGTCGCAGATCGTAAATGGAATCCAGGGATT
CCAAGCGGAGTTCGTGCAGATCTACCCAGTGCAACTGATCCGATCCTTTC
TGGAACCCAGTGCCACCCAAACAAGTCCTCAACTGTCGGAACTCTGGCGT
CGTCTGGTGGCCTTGCGTCCAGTTTACGAAAGAGTTTTGGCCACTCCACC
CGGCAAGGCCATCACTGCTGAACTCCAGAGACTGGGCGTGGATGTGGGTG
GTGTAGACGCCCTTATCCGTTATCAGTTCGGTTGGAGCAACGTCACCTTT
CCGAGCTACGATTACACAGATTACCTGTACTAGAAGCTTTCTAGACCATT
CGTTTGGCGCGCAGAAGAGGG

BS27463.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:48:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG13905-RB 717 CG13905-PB 1..717 17..733 3585 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:48:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG13905-RB 913 CG13905-RB 1..718 17..734 3590 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:48:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 902898..903615 17..734 3590 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:48:35 has no hits.

BS27463.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-16 10:15:51 Download gff for BS27463.complete
Subject Subject Range Query Range Percent Splice Strand
CG13905-RB 1..722 17..739 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:23:14 Download gff for BS27463.complete
Subject Subject Range Query Range Percent Splice Strand
CG13905-RB 1..722 17..739 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:17:19 Download gff for BS27463.complete
Subject Subject Range Query Range Percent Splice Strand
CG13905-RB 1..722 17..739 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:17:19 Download gff for BS27463.complete
Subject Subject Range Query Range Percent Splice Strand
3L 902898..903619 17..739 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:23:14 Download gff for BS27463.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 902898..903619 17..739 99   Plus

BS27463.pep Sequence

Translation from 16 to 732

> BS27463.pep
MRFIGCAFLGFMCLVAFPSATPAILAPIRPYGQNGTLAQQNNFALELKSV
IRQIPVDNIEKLVQTYLLNDIEFQGVIRAINSLPAYRFYRQLINQPEVRQ
LQQWITQQLILSGGGPKIFDYLELEIKILNKYPYWSQIVNGIQGFQAEFV
QIYPVQLIRSFLEPSATQTSPQLSELWRRLVALRPVYERVLATPPGKAIT
AELQRLGVDVGGVDALIRYQFGWSNVTFPSYDYTDYLY*

BS27463.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG13905-PB 238 CG13905-PB 1..238 1..238 1235 100 Plus
CG14963-PA 261 CG14963-PA 29..228 21..226 310 35.9 Plus