BS27470.complete Sequence
750 bp assembled on 2011-09-23
GenBank Submission: KX804642
> BS27470.complete
GAAGTTATCAGTCGACATGTCATTTAAACTATCTTTGCATTGTCTGCTGA
TCCTGGCAGGATATCTCACTTCAATTGAAGCCGAAGTTTTCCCGCAGTGC
GCAAATGCTCCATTGGATACCTTTGTCATGGCCATCGAAGATTGCGCTTC
ATACATCTATTGCAATGGAGAAGACTCCTTCCGAGACAGCTGCCCCGAGT
CCACCTACTTTGACGATCGAACCCAAGAGTGTGCCTTTGATGATGAGGGT
GTGTGTCTAAGGAACTCAGACTCAGTCCAGACTGAGGAGCAGCCCGATAA
GCAAACTACTGGTGAGGAGCAGAGCGGGATCGAAGAAACCACTCCCGTTC
CAACACCGCCTTCTGATTACGCCTCTACAGGATCTGCGGACTCTTCTACT
TTCCAAGCTGATTCTACAACAACCCCTACAGAATCAATTCCTTCAGTGAC
TGAGCCACCGACTACATCTGCTACGCCATCCTCCCCATCTGCAAAGCCTT
CCTCTCCAGCTCAGGAAAGGCCGCACTGCGACATTTCCGGAGATGGTGAC
CATCCTCATCCCCAGCGGTGCGAGTACTACTACAGGTGCCTCAGCGGCTA
TCTGACCATTGTGAGATGTCCTTACAAGTATGGCTGGGACTTTCCTACAA
AGCAATGCAAGCCTAGCAGCGAGGCTCAGTGCTTTAGTTATAGCTACTAG
AAGCTTTCTAGACCATTCGTTTGGGCGGGGCGAGAGCGGGGGGGGGGGGG
BS27470.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:58:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33263-RA | 684 | CG33263-PA | 1..684 | 17..700 | 3420 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:58:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33263-RA | 849 | CG33263-RA | 1..685 | 17..701 | 3425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:58:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13423484..13424169 | 701..16 | 3430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:58:13 has no hits.
BS27470.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-23 15:34:26 Download gff for
BS27470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33263-RA | 1..688 | 17..707 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:03:19 Download gff for
BS27470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33263-RA | 1..688 | 17..707 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:29:44 Download gff for
BS27470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33263-RA | 1..688 | 17..707 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:29:44 Download gff for
BS27470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13423481..13424168 | 17..707 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:03:19 Download gff for
BS27470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13416581..13417268 | 17..707 | 99 | | Minus |
BS27470.pep Sequence
Translation from 16 to 699
> BS27470.pep
MSFKLSLHCLLILAGYLTSIEAEVFPQCANAPLDTFVMAIEDCASYIYCN
GEDSFRDSCPESTYFDDRTQECAFDDEGVCLRNSDSVQTEEQPDKQTTGE
EQSGIEETTPVPTPPSDYASTGSADSSTFQADSTTTPTESIPSVTEPPTT
SATPSSPSAKPSSPAQERPHCDISGDGDHPHPQRCEYYYRCLSGYLTIVR
CPYKYGWDFPTKQCKPSSEAQCFSYSY*
BS27470.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:20:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33263-PA | 227 | CG33263-PA | 1..227 | 1..227 | 1245 | 100 | Plus |
| obst-H-PA | 269 | CG33983-PA | 3..251 | 4..226 | 238 | 24.3 | Plus |
| CG33985-PA | 277 | CG33985-PA | 5..268 | 5..224 | 232 | 24.9 | Plus |
| CG7252-PA | 474 | CG7252-PA | 9..207 | 7..202 | 176 | 28.6 | Plus |
| CG42729-PA | 185 | CG42729-PA | 11..172 | 12..214 | 159 | 23.7 | Plus |
