BS27494.complete Sequence
452 bp assembled on 2011-10-18
GenBank Submission: KX803238
> BS27494.complete
GAAGTTATCAGTCGACATGATTCGAAAGTATTTAGTTCTTATCTTAGTCC
TGGGTTTCCTTCATCTCACCTGGAGTTCATCGGGGTCGTGCAAGGATGGT
TTGGTTTTTAACCCCAAAAAGCGGGTATGTGAACCGAAGCCAACGACAGA
ACCTCCAGATACTTGCCGACCCGGAACGTACTGGATTCTAGAGAAGAAAT
CGTGTATCAAGTTGCGGCAAGTAATGTCTGGATATTTTCCTGCAAAACCT
GAAAAGCCCATCCAAGACCTGAAGTGCCCCAAAGGATTAATTTCTTTGGG
AAATTTGTGTGTAAGGGAGTTAAAAATTAAAAAAAAATCTCAAGGGAGCG
GTAAAAACGGAATAGAGGTGGATATGGACGATAAATATAAAATTGTCATA
AAAGAAAAACAGACTGACCCTCCTCTTGATGCATAAAAGCTTTCTAGACC
AT
BS27494.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:15:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp51E-RA | 420 | CG42476-PA | 1..420 | 17..436 | 2100 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:15:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp51E-RA | 538 | CG42476-RA | 8..428 | 17..437 | 2105 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:14:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15192738..15193004 | 437..171 | 1335 | 100 | Minus |
| 2R | 25286936 | 2R | 15193068..15193221 | 170..17 | 770 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:15:00 has no hits.
BS27494.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-18 10:25:22 Download gff for
BS27494.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp51E-RA | 8..425 | 17..434 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:51:48 Download gff for
BS27494.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp51E-RA | 8..425 | 17..434 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:55:29 Download gff for
BS27494.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp51E-RA | 8..425 | 17..434 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:55:29 Download gff for
BS27494.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15192741..15193004 | 171..434 | 100 | <- | Minus |
| 2R | 15193068..15193221 | 17..170 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:51:48 Download gff for
BS27494.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11080246..11080509 | 171..434 | 100 | <- | Minus |
| arm_2R | 11080573..11080726 | 17..170 | 100 | | Minus |
BS27494.pep Sequence
Translation from 16 to 435
> BS27494.pep
MIRKYLVLILVLGFLHLTWSSSGSCKDGLVFNPKKRVCEPKPTTEPPDTC
RPGTYWILEKKSCIKLRQVMSGYFPAKPEKPIQDLKCPKGLISLGNLCVR
ELKIKKKSQGSGKNGIEVDMDDKYKIVIKEKQTDPPLDA*
BS27494.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:35:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp51E-PA | 139 | CG42476-PA | 1..139 | 1..139 | 746 | 100 | Plus |
