BS27514.complete Sequence
1007 bp assembled on 2012-04-25
GenBank Submission: KX801619
> BS27514.complete
GAAGTTATCAGTCGACATGAGTTCCGCTGAGTACTACCCATTCAAGTGCA
CACCCACTGTCTACCCGGCGGATCCCTTCGATCCCGTCGAGGATGCGGCT
ATTCTGCGCAAGGCGATGAAAGGCTTCGGCACCGACGAGAAGGCCATCAT
CGAGATCCTGGCCAGGCGTGGCATCGTCCAGCGTTTGGAGATCGCTGAGG
CGTTCAAGACCTCGTACGGCAAGGACCTGATCTCGGACCTCAAGTCCGAA
CTGGGCGGCAAATTCGAGGATGTTATCCTGGCTCTGATGACGCCGCTGCC
CCAGTTCTATGCCCAGGAGCTGCACGACGCCATCTCGGGACTGGGAACCG
ACGAGGAGGCCATCATCGAGATCCTCTGCACGCTGTCCAACTACGGCATC
AAGACCATTGCCCAGTTCTACGAGCAGAGCTTCGGCAAGTCCCTAGAGTC
CGACCTGAAGGGCGACACCAGTGGCCACTTCAAGCGGCTGTGTGTCTCGC
TCGTCCAGGGCAACCGGGATGAGAACCAGGGCGTGGACGAGGCCGCGGCC
ATCGCCGATGCCCAGGCTCTGCACGACGCCGGCGAGGGACAGTGGGGCAC
AGATGAGTCCACCTTCAACTCGATCCTGATCACCCGCTCCTACCAGCAGC
TGCGCCAGATCTTCCTCGAATACGAGAATCTGTCGGGCAACGACATCGAG
AAGGCCATCAAGCGGGAGTTTAGCGGCTCCGTGGAGAAGGGTTTCCTGGC
CATCGTCAAGTGCTGCAAGTCCAAGATCGACTACTTTTCGGAGCGCCTGC
ACGACTCAATGGCCGGCATGGGCACCAAGGACAAGACGCTGATCCGCATC
ATTGTCAGCCGGTCGGAGATCGATCTGGGTGACATCAAGGAGGCATTCCA
GAACAAGTACGGCAAGAGCTTGGAGTCCTGGATCAAGGGCGATACATCCG
GCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAAGCTTTCT
AGACCAT
BS27514.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:02:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AnxB9-RF | 975 | CG5730-PF | 1..975 | 17..991 | 4875 | 100 | Plus |
| AnxB9-RE | 975 | CG5730-PE | 1..975 | 17..991 | 4875 | 100 | Plus |
| AnxB9-RC | 975 | CG5730-PC | 1..975 | 17..991 | 4875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:02:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AnxB9-RF | 1457 | CG5730-RF | 95..1071 | 17..993 | 4885 | 100 | Plus |
| AnxB9-RE | 1456 | CG5730-RE | 94..1070 | 17..993 | 4885 | 100 | Plus |
| AnxB9-RC | 1432 | CG5730-RC | 70..1046 | 17..993 | 4885 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:02:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21068067..21068777 | 45..755 | 3555 | 100 | Plus |
| 3R | 32079331 | 3R | 21068837..21069020 | 755..938 | 920 | 100 | Plus |
| 3R | 32079331 | 3R | 21069311..21069368 | 936..993 | 290 | 100 | Plus |
| X | 23542271 | X | 16418705..16418779 | 391..317 | 225 | 86.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:02:30 has no hits.
BS27514.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:17:14 Download gff for
BS27514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AnnIX-RC | 82..1054 | 17..989 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:46 Download gff for
BS27514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AnxB9-RC | 70..1042 | 17..989 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:58 Download gff for
BS27514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AnxB9-RC | 70..1042 | 17..989 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:55:58 Download gff for
BS27514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21067470..21067499 | 17..46 | 100 | -> | Plus |
| 3R | 21068069..21068777 | 47..755 | 100 | -> | Plus |
| 3R | 21068838..21069019 | 756..937 | 100 | -> | Plus |
| 3R | 21069313..21069364 | 938..989 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:46 Download gff for
BS27514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16893192..16893221 | 17..46 | 100 | -> | Plus |
| arm_3R | 16893791..16894499 | 47..755 | 100 | -> | Plus |
| arm_3R | 16894560..16894741 | 756..937 | 100 | -> | Plus |
| arm_3R | 16895035..16895086 | 938..989 | 100 | | Plus |
BS27514.pep Sequence
Translation from 16 to 990
> BS27514.pep
MSSAEYYPFKCTPTVYPADPFDPVEDAAILRKAMKGFGTDEKAIIEILAR
RGIVQRLEIAEAFKTSYGKDLISDLKSELGGKFEDVILALMTPLPQFYAQ
ELHDAISGLGTDEEAIIEILCTLSNYGIKTIAQFYEQSFGKSLESDLKGD
TSGHFKRLCVSLVQGNRDENQGVDEAAAIADAQALHDAGEGQWGTDESTF
NSILITRSYQQLRQIFLEYENLSGNDIEKAIKREFSGSVEKGFLAIVKCC
KSKIDYFSERLHDSMAGMGTKDKTLIRIIVSRSEIDLGDIKEAFQNKYGK
SLESWIKGDTSGDYKRALLAIVGF*
BS27514.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:22:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AnxB9-PF | 324 | CG5730-PF | 1..324 | 1..324 | 1654 | 100 | Plus |
| AnxB9-PE | 324 | CG5730-PE | 1..324 | 1..324 | 1654 | 100 | Plus |
| AnxB9-PC | 324 | CG5730-PC | 1..324 | 1..324 | 1654 | 100 | Plus |
| AnxB9-PB | 324 | CG5730-PB | 1..324 | 1..324 | 1600 | 96.6 | Plus |
| AnxB9-PD | 324 | CG5730-PD | 1..324 | 1..324 | 1600 | 96.6 | Plus |
