BS27517.complete Sequence
653 bp assembled on 2011-09-12
GenBank Submission: KX800721
> BS27517.complete
GAAGTTATCAGTCGACATGATGCACTACCGCAAGGCCGAGAATGTGGAGA
AGGAGCTGAGCAAGAGCGATCTGCCATTCGAGGACTGCATGCCAAAGTCC
CAAAAGGATTTTTTGTGGATGCATGTAAAAGGCGGTACCAAAGTGAGCAA
TGTGATTGAGTTTGCTCAGGAGGCGCTGAACAAGGGCGAGCACAGATGCG
TGGTGTGGAGCGGATCCGGCGGAGGAGTGGTGAAGACCATATCCTGTGCC
GAGGTCCTCAAGCGGAGCCACCCCCTCTACCAGGTGACGCGCATGGCCTA
CACCAGTGTGGAGGAGCACTGGAAGCCGCAAATGGAAGGCCTGGAGGAGA
TTATAGTCACACGCCAAATACCCACCCTGCACATCCTCATGAGTCTGGAC
GAGCTGCCGGATACTATAGATGGCTTACAAAAGCCAAATACGTCCACTGA
TTTTTGGGATGGCGGAGGAGCACAGCAACAGCCACATCCACGTTCCCAGC
CCCGCCATCAGCAGCAGCCACATAAACCAGGGGCTGGGCGTGGGGGTCGG
CCGAACAAACGGACCAGACCCGGACGCAATAAACCAGGCCAACAACCCGA
AAAACCTGCCGCTGAAGAGAATTTACCCGCCAGTTAGAAGCTTTCTAGAC
CAT
BS27517.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:44:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9422-RD | 621 | CG9422-PD | 1..621 | 17..637 | 3105 | 100 | Plus |
CG9422-RC | 621 | CG9422-PC | 1..621 | 17..637 | 3105 | 100 | Plus |
CG9422-RA | 621 | CG9422-PA | 1..621 | 17..637 | 3105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:44:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9422-RD | 1310 | CG9422-RD | 606..1227 | 17..638 | 3110 | 100 | Plus |
CG9422-RC | 1388 | CG9422-RC | 112..733 | 17..638 | 3110 | 100 | Plus |
CG9422-RA | 816 | CG9422-RA | 112..733 | 17..638 | 3110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:44:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 6692292..6692507 | 423..638 | 1080 | 100 | Plus |
2R | 25286936 | 2R | 6691882..6692063 | 125..306 | 910 | 100 | Plus |
2R | 25286936 | 2R | 6692118..6692236 | 305..423 | 595 | 100 | Plus |
2R | 25286936 | 2R | 6691718..6691827 | 17..126 | 550 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 06:44:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2455..2512 | 466..522 | 116 | 69 | Plus |
BS27517.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-12 10:53:11 Download gff for
BS27517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9422-RC | 79..699 | 17..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:52:28 Download gff for
BS27517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9422-RA | 112..732 | 17..637 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:53:04 Download gff for
BS27517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9422-RA | 112..732 | 17..637 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:53:04 Download gff for
BS27517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 6691718..6691825 | 17..124 | 100 | -> | Plus |
2R | 6691882..6692063 | 125..306 | 100 | -> | Plus |
2R | 6692120..6692236 | 307..423 | 100 | -> | Plus |
2R | 6692293..6692506 | 424..637 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:52:28 Download gff for
BS27517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2579223..2579330 | 17..124 | 100 | -> | Plus |
arm_2R | 2579387..2579568 | 125..306 | 100 | -> | Plus |
arm_2R | 2579625..2579741 | 307..423 | 100 | -> | Plus |
arm_2R | 2579798..2580011 | 424..637 | 100 | | Plus |
BS27517.pep Sequence
Translation from 16 to 636
> BS27517.pep
MMHYRKAENVEKELSKSDLPFEDCMPKSQKDFLWMHVKGGTKVSNVIEFA
QEALNKGEHRCVVWSGSGGGVVKTISCAEVLKRSHPLYQVTRMAYTSVEE
HWKPQMEGLEEIIVTRQIPTLHILMSLDELPDTIDGLQKPNTSTDFWDGG
GAQQQPHPRSQPRHQQQPHKPGAGRGGRPNKRTRPGRNKPGQQPEKPAAE
ENLPAS*
BS27517.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:11:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9422-PD | 206 | CG9422-PD | 1..206 | 1..206 | 1117 | 100 | Plus |
CG9422-PC | 206 | CG9422-PC | 1..206 | 1..206 | 1117 | 100 | Plus |
CG9422-PA | 206 | CG9422-PA | 1..206 | 1..206 | 1117 | 100 | Plus |